RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 GVINP1Q7Z2Y8 2422 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 A0A1B0GVT2 93 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 A0A1W2PR77 199 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 CDX4O14627 284 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 TOR1BO14657 336 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 FZD6O60353 706 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 GDF9O60383 454 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 GJB3O75712 270 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 PGLSO95336 258 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 CPP00450 1065 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 ZNF883P0CG24 379 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 MMP12P39900 470 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 CSNK1EP49674 416 aaKnown RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 TERF1P54274 439 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 RPL26P61254 145 aaKnown RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 TRAF2Q12933 501 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 ZBTB17Q13105 803 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 SGCGQ13326 291 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 SLC14A1Q13336 389 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 PUM1Q14671 1186 aaKnown RBP eCLIP12.64□□□□□ -0.394e-7■■■□□ 16.2
VEGFA-225ENST00000523950 AGERQ15109 404 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 RSPO4Q2I0M5 234 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 TEX44Q53QW1 395 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 SEL1L3Q68CR1 1132 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 DPPA4Q7L190 304 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 ZSWIM9Q86XI8 627 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 DCP2Q8IU60 420 aaKnown RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 CDKL3Q8IVW4 592 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 MINDY1Q8N5J2 469 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 ARRDC2Q8TBH0 407 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 HAUS1Q96CS2 278 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 NSMCE3Q96MG7 304 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 GTPBP2Q9BX10 602 aaKnown RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 HEMGNQ9BXL5 484 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 LZTFL1Q9NQ48 299 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 RRAGDQ9NQL2 400 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 RXFP3Q9NSD7 469 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 KCTD5Q9NXV2 234 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 DNPEPQ9ULA0 475 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 RPL26L1Q9UNX3 145 aaKnown RBP12.64□□□□□ -0.39
VEGFA-225ENST00000523950 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 ANKRD6Q9Y2G4 727 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 PPIL1Q9Y3C6 166 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 TTLL3Q9Y4R7 772 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 PCDHGC4Q9Y5F7 938 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 RAI2Q9Y5P3 530 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 HS3ST3A1Q9Y663 406 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 SLCO1B1Q9Y6L6 691 aa12.64□□□□□ -0.39
VEGFA-225ENST00000523950 DOCK9Q9BZ29 2069 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 LRRK1Q38SD2 2015 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 IGLON5A6NGN9 336 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 A6NNZ2 444 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 SLC31A1O15431 190 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 YKT6O15498 198 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 ZSCAN12O43309 604 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 OPHN1O60890 802 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 CYP2A6P11509 494 aaPredicted RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 PTPN3P26045 913 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 CTSKP43235 329 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 ID4P47928 161 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 OTUD4Q01804 1114 aaKnown RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 DSC2Q02487 901 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 LLGL1Q15334 1064 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 RPS6KA1Q15418 735 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 KIF19Q2TAC6 998 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 SEL1L2Q5TEA6 688 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 MEI1Q5TIA1 1274 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 USP45Q70EL2 814 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 ABI3BPQ7Z7G0 1075 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 ZC3H18Q86VM9 953 aaKnown RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 CNTD1Q8N815 330 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 ACTL9Q8TC94 416 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 PDCD6IPQ8WUM4 868 aaKnown RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 HTR3CQ8WXA8 447 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 TEKT5Q96M29 485 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 MCCC1Q96RQ3 725 aaPredicted RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 TDRD1Q9BXT4 1180 aaKnown RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 SLC25A51Q9H1U9 297 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 CARD9Q9H257 536 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 ERVMER34-1Q9H9K5 563 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 GDF3Q9NR23 364 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 SAE1Q9UBE0 346 aaPredicted RBP12.63□□□□□ -0.39
VEGFA-225ENST00000523950 GGT7Q9UJ14 662 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 TRHDEQ9UKU6 1024 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 TMEM131Q92545 1883 aa12.63□□□□□ -0.39
VEGFA-225ENST00000523950 TTC24A2A3L6 582 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 C4orf47A7E2U8 309 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 TLR4O00206 839 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 PSMD11O00231 422 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 FPGTO14772 594 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 MMP20O60882 483 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 PAK4O96013 591 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 WNT1P04628 370 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 C6P13671 934 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 PRLRP16471 622 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 RABIFP47224 123 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms