RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 HASPINQ8TF76 798 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 SLC5A5Q92911 643 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 ARL8AQ96BM9 186 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 KIF1BPQ96EK5 621 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 C16orf92Q96LL3 132 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 C1orf74Q96LT6 269 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 TEKT5Q96M29 485 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 ZDHHC5Q9C0B5 715 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 BOLA2Q9H3K6 86 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 EBF3Q9H4W6 596 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 GCM1Q9NP62 436 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 GKN1Q9NS71 199 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 C14orf119Q9NWQ9 140 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 H2AFY2Q9P0M6 372 aaPredicted RBP5.33□□□□□ -1.56
PABPC1-223ENST00000523636 USP36Q9P275 1121 aaKnown RBP5.33□□□□□ -1.56
PABPC1-223ENST00000523636 DKK3Q9UBP4 350 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 PLA2G2DQ9UNK4 145 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 ANGPTL3Q9Y5C1 460 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 PCDHGA1Q9Y5H4 931 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 N6AMT1Q9Y5N5 214 aa5.33□□□□□ -1.56
PABPC1-223ENST00000523636 DIDO1Q9BTC0 2240 aaKnown RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 LINC00854A0A1B0GVQ3 168 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ARL5CA6NH57 179 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 HIP1O00291 1037 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 MTSS1O43312 755 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 SOCS5O75159 536 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 TUSC2O75896 110 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 SNX4O95219 450 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 BAG4O95429 457 aaKnown RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 MBD3O95983 291 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CCNE2O96020 404 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ATF2P15336 505 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 HDCP19113 662 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 GLDCP23378 1020 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ATP5F1P24539 256 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CD40P25942 277 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ATP5DP30049 168 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 HOXA11P31270 313 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 MLH1P40692 756 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 STAT5AP42229 794 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CASP5P51878 434 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 MAPK10P53779 464 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 DLG4P78352 724 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ITGB3BPQ13352 177 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF484Q5JVG2 852 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 FAM171A1Q5VUB5 890 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 VASNQ6EMK4 673 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CAPRIN2Q6IMN6 1127 aaKnown RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 RAB12Q6IQ22 244 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 DARS2Q6PI48 645 aaKnown RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CD300LDQ6UXZ3 194 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 SPNS3Q6ZMD2 512 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 GAREM2Q75VX8 874 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CEP57Q86XR8 500 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 IGDCC3Q8IVU1 814 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 GRAMD1CQ8IYS0 662 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 IL17RDQ8NFM7 739 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 GOT1L1Q8NHS2 421 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ASB15Q8WXK1 588 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ERCC4Q92889 916 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 HPS3Q969F9 1004 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 RILPL2Q969X0 211 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 RRP36Q96EU6 259 aaKnown RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF419Q96HQ0 510 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 VCPIP1Q96JH7 1222 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 PIGSQ96S52 555 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 P2RY13Q9BPV8 354 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 UNKQ9C0B0 810 aaKnown RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 MAGEH1Q9H213 219 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 TMEM60Q9H2L4 133 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 VAT1LQ9HCJ6 419 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ZDHHC4Q9NPG8 344 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 TOMM22Q9NS69 142 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 DONSONQ9NYP3 566 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ORC3Q9UBD5 711 aaPredicted RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 SLC9A2Q9UBY0 812 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 VPS28Q9UK41 221 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 SLC13A4Q9UKG4 626 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 PIN4Q9Y237 131 aaKnown RBP5.32□□□□□ -1.56
PABPC1-223ENST00000523636 ATP6V1DQ9Y5K8 247 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CDY1Q9Y6F8 540 aa5.32□□□□□ -1.56
PABPC1-223ENST00000523636 CROCCQ5TZA2 2017 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 MN1Q10571 1320 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 TTC41PQ6P2S7 1318 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 KRTAP9-6A0A140TA67 174 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF839A8K0R7 811 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 GCOM1H8Y6P7 765 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF213O14771 459 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 NDC80O14777 642 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CASQ2O14958 399 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ADAMTS3O15072 1205 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 RANBP6O60518 1105 aaKnown RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 SRGAP2O75044 1071 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 PPFIA2O75334 1257 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 IPO7O95373 1038 aaKnown RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 POLR2MP0CAP2 368 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 MED14OSP0DP75 135 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 MYL4P12829 197 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms