RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-215ENST00000522115 PCDHGB1Q9Y5G3 927 aa4.34□□□□□ -1.71
PTPN12-215ENST00000522115 A0A1W2PQM1 296 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 RGS11O94810 467 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 ZBTB11O95625 1053 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 MT-CYBP00156 380 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 HNRNPA1P09651 372 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 POU1F1P28069 291 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 MAPK9P45984 424 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 EFNA5P52803 228 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 RAD23BP54727 409 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 RRP1P56182 461 aaKnown RBP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 POU5F1BQ06416 359 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 GRSF1Q12849 480 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 GPR68Q15743 365 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 SETMARQ53H47 684 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 SLC22A25Q6T423 547 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 GPAT4Q86UL3 456 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 FBXL8Q96CD0 374 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 ZC3HAV1LQ96H79 300 aaKnown RBP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 TBATAQ96M53 351 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 TTYH1Q9H313 450 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-215ENST00000522115 OCIAD1Q9NX40 245 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 PROCRQ9UNN8 238 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 NFS1Q9Y697 457 aa4.33□□□□□ -1.72
PTPN12-215ENST00000522115 CNTNAP2Q9UHC6 1331 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 SMTNL1A8MU46 457 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 TNPO2O14787 897 aaKnown RBP4.32□□□□□ -1.72
PTPN12-215ENST00000522115 TACC1O75410 805 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 HOXB5P09067 269 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 IRF1P10914 325 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 ETFAP13804 333 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 HNRNPH1P31943 449 aaKnown RBP4.32□□□□□ -1.72
PTPN12-215ENST00000522115 PEX5P50542 639 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 HDAC4P56524 1084 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 UFM1P61960 85 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 GALNT2Q10471 571 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 PTP4A2Q12974 167 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
PTPN12-215ENST00000522115 CES5AQ6NT32 575 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 SPSB3Q6PJ21 355 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 LINGO2Q7L985 606 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 SCCPDHQ8NBX0 429 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 AGBL3Q8NEM8 1001 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 BEST2Q8NFU1 509 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 LILRB1Q8NHL6 650 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-215ENST00000522115 HVCN1Q96D96 273 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 APOPT1Q96IL0 206 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 LBHD1Q9BQE6 289 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-215ENST00000522115 PLEKHA4Q9H4M7 779 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 BRF2Q9HAW0 419 aa4.32□□□□□ -1.72
PTPN12-215ENST00000522115 DENND3A2RUS2 1198 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 TSPAN4O14817 238 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 TFP02787 698 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 MMP2P08253 660 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 EDN2P20800 178 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 COMPP49747 757 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 RPP30P78346 268 aaKnown RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 POU3F1Q03052 451 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 ILF3Q12906 894 aaKnown RBP eCLIP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 FOXD4Q12950 439 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 COASYQ13057 564 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 MYBPHQ13203 477 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 DHX34Q14147 1143 aaKnown RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 VEPH1Q14D04 833 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 EFNB3Q15768 340 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 CALCRLQ16602 461 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 TCTN1Q2MV58 587 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 AMZ1Q400G9 498 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 SGO1Q5FBB7 561 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 XKR9Q5GH70 373 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 PLEKHA7Q6IQ23 1121 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 FAM122CQ6P4D5 195 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 INO80CQ6PI98 192 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 CPLX2Q6PUV4 134 aaKnown RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 ZC3HC1Q86WB0 502 aaKnown RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 PGBD5Q8N414 524 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 TSPYL6Q8N831 410 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 PPM1EQ8WY54 764 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 ERGIC1Q969X5 290 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 RNF125Q96EQ8 232 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 SCMH1Q96GD3 660 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 ZNF385AQ96PM9 386 aaKnown RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 H2AFJQ9BTM1 129 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 C1QTNF4Q9BXJ3 329 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 DDX4Q9NQI0 724 aaKnown RBP4.31□□□□□ -1.72
PTPN12-215ENST00000522115 KCND2Q9NZV8 630 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 SLCO3A1Q9UIG8 710 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 KCNG2Q9UJ96 466 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 CYP46A1Q9Y6A2 500 aa4.31□□□□□ -1.72
PTPN12-215ENST00000522115 A0A1B0GVC2 190 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 MAGEA13PA6NCF6 341 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 NPIPB11E5RHQ5 1161 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 ZIC3O60481 467 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 F9P00740 461 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 PYGLP06737 847 aa4.3□□□□□ -1.72
PTPN12-215ENST00000522115 SNRNP70P08621 437 aaKnown RBP4.3□□□□□ -1.72
PTPN12-215ENST00000522115 DDX5P17844 614 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms