RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 TMCC3Q9ULS5 477 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 LTA4HP09960 611 aaKnown RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 ANPEPP15144 967 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 CAPZA2P47755 286 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 MTTPP55157 894 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 NEDD8Q15843 81 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 ENKURQ8TC29 256 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 DQX1Q8TE96 717 aaKnown RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 BORCS5Q969J3 196 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 KLHL31Q9H511 634 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 AASDHPPTQ9NRN7 309 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 KLHL20Q9Y2M5 609 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 SH3GLB1Q9Y371 365 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 ABHD14A-ACY1A0A1B0GW23 586 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 NR5A2O00482 541 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 CCL16O15467 120 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 SHOX2O60902 331 aaPredicted RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 TAS2R40P59535 323 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 AUHQ13825 339 aaKnown RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 ZNF697Q5TEC3 545 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 IKBIPQ70UQ0 350 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 CTU1Q7Z7A3 348 aaKnown RBP16.28■□□□□ 0.2
USP42-207ENST00000521713 RASAL3Q86YV0 1011 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 ZNF614Q8N883 585 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 KLHL28Q9NXS3 571 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 SH3BP4Q9P0V3 963 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
USP42-207ENST00000521713 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.27■□□□□ 0.2
USP42-207ENST00000521713 MAGEC1O60732 1142 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 PTPN9P43378 593 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 CCT8P50990 548 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 BNC1Q01954 994 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 NPY5RQ15761 445 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 CYP4Z1Q86W10 505 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 C7orf43Q8WVR3 580 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 TIFAQ96CG3 184 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 CXorf40BQ96DE9 158 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 REXO4Q9GZR2 422 aaKnown RBP16.27■□□□□ 0.2
USP42-207ENST00000521713 ARMC7Q9H6L4 198 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 EURLQ9NYK6 297 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 PCDHB9Q9Y5E1 797 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 WNT3AP56704 352 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 ITGADQ13349 1161 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 AADACL2Q6P093 401 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 UNC5AQ6ZN44 842 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 PCDHB18PQ96TA0 734 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 TCF25Q9BQ70 676 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 KRT84Q9NSB2 600 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 ZMYM5Q9UJ78 669 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 FAM20BO75063 409 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 ZDHHC20Q5W0Z9 365 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 FAM120BQ96EK7 910 aaKnown RBP16.27■□□□□ 0.2
USP42-207ENST00000521713 BTBD3Q9Y2F9 522 aa16.27■□□□□ 0.2
USP42-207ENST00000521713 RGS14O43566 566 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 C1RP00736 705 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 PIGRP01833 764 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 ALDH9A1P49189 494 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 IRF8Q02556 426 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 PCED1BQ96HM7 432 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 COPS8Q99627 209 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 HGH1Q9BTY7 390 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 PNPLA3Q9NST1 481 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 ASB3Q9Y575 518 aa16.27■□□□□ 0.19
USP42-207ENST00000521713 SMNDC1O75940 238 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■■■□ 23.6
USP42-207ENST00000521713 AMD1P17707 334 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 ACSM2AQ08AH3 577 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 ACSM2BQ68CK6 577 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 TMEM26Q6ZUK4 368 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 FNDC5Q8NAU1 212 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 SLC4A11Q8NBS3 891 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 NPLOC4Q8TAT6 608 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 EBNA1BP2Q99848 306 aaKnown RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 PHACTR1Q9C0D0 580 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 RMI1Q9H9A7 625 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 GLOD4Q9HC38 313 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 MRASO14807 208 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 MSI1O43347 362 aaKnown RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 SEC22BO75396 215 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 CCL5P13501 91 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 TACR2P21452 398 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 CDH3P22223 829 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 SP100P23497 879 aaPredicted RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 PBX1P40424 430 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 MARCKSL1P49006 195 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 NME5P56597 212 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 TTC23Q5W5X9 447 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 TPGS2Q68CL5 300 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 POP5Q969H6 163 aaKnown RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 P2RY11Q96G91 374 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 EXOC2Q96KP1 924 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 CDRT15Q96T59 188 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 C6orf62Q9GZU0 229 aaPredicted RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 CACNB4O00305 520 aaPredicted RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 SNPHO15079 494 aa16.26■□□□□ 0.19
USP42-207ENST00000521713 CD3EAPO15446 510 aaKnown RBP16.26■□□□□ 0.19
USP42-207ENST00000521713 ACSL4O60488 711 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms