RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 INTS12Q96CB8 462 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 POLR3CQ9BUI4 534 aaPredicted RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 LHPPQ9H008 270 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 CDT1Q9H211 546 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 MUC13Q9H3R2 512 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 FZD3Q9NPG1 666 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 CHCHD3Q9NX63 227 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 UTP6Q9NYH9 597 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 LIMA1Q9UHB6 759 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 INTS6Q9UL03 887 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 ODF2LQ9ULJ1 636 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 NOL7Q9UMY1 257 aaKnown RBP6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 FAM96BQ9Y3D0 163 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 HS3ST3B1Q9Y662 390 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 KCNE2Q9Y6J6 123 aa6.88□□□□□ -1.31
NUDCD1-204ENST00000521439 FHAD1B1AJZ9 1412 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 KLRF2D3W0D1 207 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 PTP4A3O75365 173 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 NDUFB8O95169 186 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 TFP02787 698 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 SRD5A1P18405 259 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 NFKBIAP25963 317 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 MAPK4P31152 587 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 ABCG1P45844 678 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 PPP3CCP48454 512 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 CLCN5P51795 746 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 IFT88Q13099 833 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 EPHA10Q5JZY3 1008 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 Q5PR19 223 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 MANEAQ5SRI9 462 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 KLHL24Q6TFL4 600 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 CCDC105Q8IYK2 499 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 CREB3L4Q8TEY5 395 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 USP6NLQ92738 828 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 SMARCE1Q969G3 411 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 BBS4Q96RK4 519 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 RETREG1Q9H6L5 497 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 NDRG3Q9UGV2 375 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 SUN2Q9UH99 717 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 MKLN1Q9UL63 735 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 CAPN7Q9Y6W3 813 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 CFAP65Q6ZU64 1925 aaKnown RBP6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 ABCA5Q8WWZ7 1642 aa6.87□□□□□ -1.31
NUDCD1-204ENST00000521439 SMG6Q86US8 1419 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 TMEM272A0A1B0GTI8 110 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 HSPB2A8KAH6 182 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 EIF3CLB5ME19 914 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 NPIPB11E5RHQ5 1161 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 IFNL4K9M1U5 179 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 TIMM44O43615 452 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 DOK2O60496 412 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 EPN2O95208 641 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 MT-CYBP00156 380 aaPredicted RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 CCDC175P0C221 793 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 PRF1P14222 555 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 CHRNB2P17787 502 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 MLH1P40692 756 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 ME1P48163 572 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 CXCR3P49682 368 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 DRG2P55039 364 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 CDH12P55289 794 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 HDAC4P56524 1084 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 CAPSQ13938 189 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 HSPB2Q16082 182 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 PXDC1Q5TGL8 231 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 SPATA1Q5VX52 437 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 CES5AQ6NT32 575 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 SLC16A12Q6ZSM3 486 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 TRAPPC11Q7Z392 1133 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 LCA5Q86VQ0 697 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 DENND6AQ8IWF6 608 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 DHX40Q8IX18 779 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 MMP21Q8N119 569 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 TMEM116Q8NCL8 245 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 GJC3Q8NFK1 279 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 NEK9Q8TD19 979 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 DENND1AQ8TEH3 1009 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 RPL36ALQ969Q0 106 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 FAM149B1Q96BN6 582 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 ZC3HAV1LQ96H79 300 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 SIN3AQ96ST3 1273 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 STRA6Q9BX79 667 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 SEZ6LQ9BYH1 1024 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 PLEKHA4Q9H4M7 779 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 EIF2B3Q9NR50 452 aaKnown RBP6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 HAO1Q9UJM8 370 aa6.86□□□□□ -1.31
NUDCD1-204ENST00000521439 SETD5Q9C0A6 1442 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 POLR1AO95602 1720 aaPredicted RBP6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 SNAP23O00161 211 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 LIASO43766 372 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 PAGE4O60829 102 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 ATP2C2O75185 946 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 PBX3P40426 434 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 PDE1CQ14123 709 aaPredicted RBP6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 LPIN1Q14693 890 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 DUSP6Q16828 381 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 DPCR1Q3MIW9 517 aa6.85□□□□□ -1.31
NUDCD1-204ENST00000521439 LRCH2Q5VUJ6 765 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms