RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 NPAS4Q8IUM7 802 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 SLC22A9Q8IVM8 553 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 OXCT2Q9BYC2 517 aaPredicted RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 ARL5AQ9Y689 179 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 GOLGA4Q13439 2230 aaKnown RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 PSME4Q14997 1843 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 M0QZQ0 153 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 TPST1O60507 370 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 FKTNO75072 461 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 HTR7P34969 479 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 CCNFP41002 786 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 PRKAA2P54646 552 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 POLE2P56282 527 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 PTK2BQ14289 1009 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 PARP15Q460N3 678 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 ZYG11AQ6WRX3 759 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 HPS6Q86YV9 775 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 FBXO39Q8N4B4 442 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 SNX31Q8N9S9 440 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 OR13C4Q8NGS5 318 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 OR4L1Q8NH43 312 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 MZB1Q8WU39 189 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 IGSF8Q969P0 613 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 RCN3Q96D15 328 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 RTP3Q9BQQ7 232 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 C11orf84Q9BUA3 381 aaPredicted RBP10.22□□□□□ -0.77
MCF2-209ENST00000520602 USP3Q9Y6I4 520 aa10.22□□□□□ -0.77
MCF2-209ENST00000520602 ZCWPW2A0A1B0GU75 182 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 MTMR11A4FU01 709 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 NR5A2O00482 541 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 ENPP3O14638 875 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 GUCA1CO95843 209 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 C1RP00736 705 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 AMHP03971 560 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 T-ENOLP0DO92 83 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 PIK3R1P27986 724 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 YBEYP58557 167 aaPredicted RBP10.21□□□□□ -0.77
MCF2-209ENST00000520602 FASTKQ14296 549 aaKnown RBP10.21□□□□□ -0.77
MCF2-209ENST00000520602 RAB41Q5JT25 222 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 RARS2Q5T160 578 aaKnown RBP10.21□□□□□ -0.77
MCF2-209ENST00000520602 OTUD1Q5VV17 481 aaPredicted RBP10.21□□□□□ -0.77
MCF2-209ENST00000520602 SCIMPQ6UWF3 145 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 RPS27LQ71UM5 84 aaKnown RBP10.21□□□□□ -0.77
MCF2-209ENST00000520602 HERC6Q8IVU3 1022 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 LRRC43Q8N309 656 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 TRPC4APQ8TEL6 797 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 WDR60Q8WVS4 1066 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 AUTS2Q8WXX7 1259 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 NT5C3BQ969T7 300 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 SKA1Q96BD8 255 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 ZNF333Q96JL9 665 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 FAR2Q96K12 515 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 OR52B2Q96RD2 323 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 KIF13BQ9NQT8 1826 aa10.21□□□□□ -0.77
MCF2-209ENST00000520602 ALDH1A2O94788 518 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 CYP11A1P05108 521 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 FGF1P05230 155 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 HLA-DPA1P20036 260 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 HMOX2P30519 316 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 MED21Q13503 144 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 IMPG1Q17R60 797 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 ISLR2Q6UXK2 745 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 MFN1Q8IWA4 741 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 PGAP3Q96FM1 320 aaPredicted RBP10.21□□□□□ -0.78
MCF2-209ENST00000520602 C8orf48Q96LL4 319 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 KIFC1Q9BW19 673 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 CSNK1G1Q9HCP0 422 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 A0A0D9SEW6 157 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 TMEM233B4DJY2 109 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 CTGFP29279 349 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 AKT1P31749 480 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 PGFP49763 221 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 LSM12Q3MHD2 195 aaKnown RBP10.21□□□□□ -0.78
MCF2-209ENST00000520602 C6orf10Q5SRN2 563 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 RETSATQ6NUM9 610 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 PHTF2Q8N3S3 785 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 PCYOX1LQ8NBM8 494 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 RDH11Q8TC12 318 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 ZNF558Q96NG5 402 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 GPR22Q99680 433 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 CLPBQ9H078 707 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 MMADHCQ9H3L0 296 aaPredicted RBP10.21□□□□□ -0.78
MCF2-209ENST00000520602 WASF2Q9Y6W5 498 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 V9GYQ6 96 aa10.21□□□□□ -0.78
MCF2-209ENST00000520602 RGSL1A5PLK6 1076 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 PEX11AO75192 247 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 FKBP6O75344 327 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 TM7SF2O76062 418 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 GOT2P00505 430 aaKnown RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 ATP5BP06576 529 aaKnown RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 RAG1P15918 1043 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 MRPS22P82650 360 aaKnown RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 IL10RBQ08334 325 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 FUT11Q495W5 492 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 SIRPB2Q5JXA9 342 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 RTP2Q5QGT7 225 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 CLEC6AQ6EIG7 209 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 KIAA0930Q6ICG6 404 aaPredicted RBP10.2□□□□□ -0.78
MCF2-209ENST00000520602 ACVR1CQ8NER5 493 aa10.2□□□□□ -0.78
MCF2-209ENST00000520602 EME1Q96AY2 570 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms