RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 CFAP52Q8N1V2 620 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 CIARTQ8N365 385 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 FBXL16Q8N461 479 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 CARNMT1Q8N4J0 409 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 CCDC112Q8NEF3 446 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 SNX29Q8TEQ0 813 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 CACTINQ8WUQ7 758 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 PATE1Q8WXA2 126 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 KCTD13Q8WZ19 329 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 MTFMTQ96DP5 389 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 NT5C1BQ96P26 610 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 SLX1AQ9BQ83 275 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 REEP2Q9BRK0 252 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 TIPINQ9BVW5 301 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 XYLT2Q9H1B5 865 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 FBXO8Q9NRD0 319 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM49BQ9NUQ9 324 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 RBAKQ9NYW8 714 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 NOP53Q9NZM5 478 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 SCHIP1Q9P0W5 487 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 SFMBT1Q9UHJ3 866 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ITM2BQ9Y287 266 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 ZGRF1Q86YA3 2104 aa6.86□□□□□ -1.31
CTNNA1-216ENST00000519489 MDC1Q14676 2089 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 KPNA3O00505 521 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ATP9BO43861 1147 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 WISP2O76076 250 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ALPIP09923 528 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 RALAP11233 206 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ADORA2BP29275 332 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 PBX1P40424 430 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 STAT1P42224 750 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ZNF131P52739 623 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 SQSTM1Q13501 440 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 DLG2Q15700 870 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 HAUS3Q68CZ6 603 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 SPECC1LQ69YQ0 1117 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 CEACAM20Q6UY09 585 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 MEX3BQ6ZN04 569 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 Q6ZS92 163 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 NCCRP1Q6ZVX7 275 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ERN2Q76MJ5 926 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 IGSF22Q8N9C0 903 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM46DQ8NEK8 389 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 OR52K2Q8NGK3 314 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ADAMTS17Q8TE56 1095 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 SCG3Q8WXD2 468 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 POMGNT1Q8WZA1 660 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 VOPP1Q96AW1 172 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 PDXPQ96GD0 296 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 PLIN2Q99541 437 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 SPATS2LQ9NUQ6 558 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ZNF358Q9NW07 568 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 SIDT1Q9NXL6 827 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 MAPK8IP1Q9UQF2 711 aa6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 GPC6Q9Y625 555 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 NYNRINQ9P2P1 1898 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-216ENST00000519489 ATP8B3O60423 1300 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 IGHV1OR21-1A0A087WYE8 117 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 A0A0U1RQS6 177 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 C1QTNF3-AMACRE9PGA6 284 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 K7ERQ8 282 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 PPM1DO15297 605 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 PROM1O43490 865 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 CTDNEP1O95476 244 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 MT-CO1P00395 513 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM163BP0C2L3 166 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 TMEM191BP0C7N4 346 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 FDPSP14324 419 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 CD33P20138 364 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 KRT2P35908 639 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 EPHA4P54764 986 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 RPS21P63220 83 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 WDR72Q3MJ13 1102 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 ZNF468Q5VIY5 522 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 ANKRD40Q6AI12 368 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 FAM199XQ6PEV8 388 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 CHSY3Q70JA7 882 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 TRAPPC11Q7Z392 1133 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 GKN2Q86XP6 184 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 OR2A12Q8NGT7 310 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 FAR1Q8WVX9 515 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 THAP4Q8WY91 577 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 ALG14Q96F25 216 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 TWNKQ96RR1 684 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 CBWD1Q9BRT8 395 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 HDAC8Q9BY41 377 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 ULBP3Q9BZM4 244 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 ILKAPQ9H0C8 392 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 SUV39H2Q9H5I1 410 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 LARSQ9P2J5 1176 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 PLEKHM1Q9Y4G2 1056 aa6.84□□□□□ -1.31
CTNNA1-216ENST00000519489 HRNRQ86YZ3 2850 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-216ENST00000519489 CNTRLQ7Z7A1 2325 aa6.83□□□□□ -1.32
CTNNA1-216ENST00000519489 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-216ENST00000519489 H0YCG3 227 aa6.83□□□□□ -1.32
CTNNA1-216ENST00000519489 M0QYT0 321 aa6.83□□□□□ -1.32
CTNNA1-216ENST00000519489 MASP2O00187 686 aa6.83□□□□□ -1.32
CTNNA1-216ENST00000519489 CCL21O00585 134 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms