RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 CKMT1AP12532 417 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 NME1P15531 152 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 MCM3P25205 808 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 DUSP3P51452 185 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 SUOXP51687 545 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 CLDN6P56747 220 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 RHOAP61586 193 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 INSM1Q01101 510 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 SERINC3Q13530 473 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 FZD2Q14332 565 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 TCEAL1Q15170 157 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 ATXN7L2Q5T6C5 722 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 LEKR1Q6ZMV7 388 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 DCBLD1Q8N8Z6 715 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 FAM181AQ8N9Y4 354 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 HCAR2Q8TDS4 363 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 HNRNPLLQ8WVV9 542 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 SYT11Q9BT88 431 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 CPEB1Q9BZB8 566 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 PARVAQ9NVD7 372 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 EVA1BQ9NVM1 165 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 DKK3Q9UBP4 350 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 IPO11Q9UI26 975 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 NENFQ9UMX5 172 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 CLCA2Q9UQC9 943 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
TRAPPC9-206ENST00000519482 CES2O00748 559 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 TOR1BO14657 336 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 FFAR2O15552 330 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 SPINT1O43278 529 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 GP1BAP07359 652 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 GZMAP12544 262 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 NDST2P52849 883 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 PFN3P60673 137 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 YPEL5P62699 121 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 PDE1CQ14123 709 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 PTK2BQ14289 1009 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 GRM3Q14832 879 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 TTC7BQ86TV6 843 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 SYCE1Q8N0S2 351 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 BTN2A2Q8WVV5 523 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 HMCESQ96FZ2 354 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 APOLD1Q96LR9 279 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 KLC2Q9H0B6 622 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 NCKIPSDQ9NZQ3 722 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 GGT7Q9UJ14 662 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 SNX12Q9UMY4 172 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 ITM2BQ9Y287 266 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 HYOU1Q9Y4L1 999 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 AK5Q9Y6K8 562 aa12.59□□□□□ -0.39
TRAPPC9-206ENST00000519482 K7ESM1 405 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 DDX3XO00571 662 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 TM7SF2O76062 418 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 MT-CO3P00414 261 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 ATP1A1P05023 1023 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 TMEM253P0C7T8 217 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 H2AFXP16104 143 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 PAFAH1B1P43034 410 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 THOP1P52888 689 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 TPI1P60174 286 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 OGDHQ02218 1023 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 ELP6Q0PNE2 266 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 MAMLD1Q13495 774 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 BRD3Q15059 726 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 ZNF542PQ5EBM4 170 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 PLEKHA7Q6IQ23 1121 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 CCDC70Q6NSX1 233 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 ZNF572Q7Z3I7 529 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 DNAAF5Q86Y56 855 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 ZNF548Q8NEK5 533 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 CXorf40AQ8TE69 158 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 CENPTQ96BT3 561 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 C1QTNF7Q9BXJ2 289 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 LRRC19Q9H756 370 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 PDFQ9HBH1 243 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 LHX3Q9UBR4 397 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 UBA2Q9UBT2 640 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 AP4E1Q9UPM8 1137 aa12.58□□□□□ -0.4
TRAPPC9-206ENST00000519482 LRP4O75096 1905 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 LY6G6EA0A0G2JKS1 128 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 TPP1O14773 563 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 AQP9O43315 295 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 OPA1O60313 960 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 MMP20O60882 483 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 NEBLO76041 1014 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 RNF8O76064 485 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 TIMP2P16035 220 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 JUNDP17535 347 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 PSMA2P25787 234 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 EIF2S3P41091 472 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 ABCG1P45844 678 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 NAA30Q147X3 362 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 CYTH1Q15438 398 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 TMEM52BQ4KMG9 183 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
TRAPPC9-206ENST00000519482 CDCP2Q5VXM1 449 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms