RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 TMEM245Q9H330 911 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 C8orf33Q9H7E9 229 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-203ENST00000517921 HEBP1Q9NRV9 189 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 THAP10Q9P2Z0 257 aaPredicted RBP10.65□□□□□ -0.7
PABPC1-203ENST00000517921 RAPGEFL1Q9UHV5 662 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 MUTYHQ9UIF7 546 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 PLA2G4CQ9UP65 541 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 SLC8A2Q9UPR5 921 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 STARD13Q9Y3M8 1113 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 WASF2Q9Y6W5 498 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 PIAS3Q9Y6X2 628 aa10.65□□□□□ -0.7
PABPC1-203ENST00000517921 EDDM13A0A1B0GTR0 161 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ZCWPW2A0A1B0GU75 182 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 PRR33A8MZF0 331 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 K7EQS6 105 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 C1QAP02745 245 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 UGT2B4P06133 528 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 CTSLP07711 333 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 SRFP11831 508 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 HNRNPLP14866 589 aaKnown RBP eCLIP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ADRA1DP25100 572 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 NMBRP28336 390 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 STX2P32856 288 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 PHBP35232 272 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 IL12RB1P42701 662 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 TNFRSF4P43489 277 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 GRIA4P48058 902 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 EIF3BP55884 814 aaKnown RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 RPL26P61254 145 aaKnown RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 FAM193AP78312 1265 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 PFKPQ01813 784 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 RAD51Q06609 339 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 TDGQ13569 410 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ENPP2Q13822 863 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 SEPT6Q14141 434 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 FRG1Q14331 258 aaKnown RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 GRM3Q14832 879 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 EFTUD2Q15029 972 aaKnown RBP eCLIP10.64□□□□□ -0.717e-11■■■□□ 17.8
PABPC1-203ENST00000517921 PON2Q15165 354 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 HNRNPA1L2Q32P51 320 aaKnown RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ANKRD20A4Q4UJ75 823 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 SPANXN3Q5MJ09 141 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 EMC10Q5UCC4 262 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 FSTL4Q6MZW2 842 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 PKN3Q6P5Z2 889 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 TRMT10BQ6PF06 316 aaKnown RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 CES3Q6UWW8 571 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 SERPINA13PQ6UXR4 307 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 NUDT18Q6ZVK8 323 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 TMEM135Q86UB9 458 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 GRIN3AQ8TCU5 1115 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 FBF1Q8TES7 1133 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 PDCD6IPQ8WUM4 868 aaKnown RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ZBTB9Q96C00 473 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 RMDN1Q96DB5 314 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 MFSD3Q96ES6 412 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 MSANTD3Q96H12 275 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ZNF778Q96MU6 729 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 FCRL3Q96P31 734 aaPredicted RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 RUFY1Q96T51 708 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 HEPHQ9BQS7 1158 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 TMEM109Q9BVC6 243 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ADGRE3Q9BY15 652 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ACBD3Q9H3P7 528 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 SUV39H2Q9H5I1 410 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ACSS3Q9H6R3 686 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 ZDHHC4Q9NPG8 344 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 SLC2A4RGQ9NR83 387 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 CHRAC1Q9NRG0 131 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 CACNA2D2Q9NY47 1150 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 RABGEF1Q9UJ41 708 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 RPL26L1Q9UNX3 145 aaKnown RBP10.64□□□□□ -0.71
PABPC1-203ENST00000517921 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 SPO11Q9Y5K1 396 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 RPS6KL1Q9Y6S9 549 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
PABPC1-203ENST00000517921 TSPAN11A1L157 253 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 MAGEB16A2A368 324 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 CCDC78A2IDD5 438 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 HEATR9A2RTY3 570 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 MROH6A6NGR9 719 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 SHISA7A6NL88 538 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 ANKRD66B4E2M5 251 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 LDB2O43679 373 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 SIN3BO75182 1162 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 LEFTY1O75610 366 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 ALDH1A2O94788 518 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 EGFP01133 1207 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 POLBP06746 335 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 PIRTP0C851 137 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 KIR2DL1P43626 348 aaPredicted RBP10.63□□□□□ -0.71
PABPC1-203ENST00000517921 IFFO1Q0D2I5 559 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 STAT4Q14765 748 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 TMEM196Q5HYL7 178 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 CEP85LQ5SZL2 805 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 C9orf64Q5T6V5 341 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 UNC5BQ8IZJ1 945 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 STK40Q8N2I9 435 aa10.63□□□□□ -0.71
PABPC1-203ENST00000517921 BLOC1S5Q8TDH9 187 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms