RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 HPP00738 406 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 IGKV2D-28P01615 120 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 RAF1P04049 648 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 CTAGE8P0CG41 777 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 TYRP14679 529 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 MMP14P50281 582 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 KRTAP12-1P59990 96 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 GAGE5Q13069 117 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 GAGE6Q13070 117 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 STK3Q13188 491 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 PABPC4Q13310 644 aaKnown RBP eCLIP-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 KLF1Q13351 362 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 DRP2Q13474 957 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 ACOX1Q15067 660 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 PTPN21Q16825 1174 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZNF691Q5VV52 312 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 OLFML2AQ68BL7 652 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 CCNI2Q6ZMN8 369 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 LINC00336Q6ZUF6 198 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 TSPAN33Q86UF1 283 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 LRRTM3Q86VH5 581 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 CTAGE4Q8IX94 777 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 ABHD12Q8N2K0 398 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 POC5Q8NA72 575 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZBTB34Q8NCN2 500 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 ABTB1Q969K4 478 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 MKL1Q969V6 931 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 CDCA5Q96FF9 252 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 PRICKLE1Q96MT3 831 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 DNAJC7Q99615 494 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 HIPK3Q9H422 1215 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 FZD8Q9H461 694 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 RAD21L1Q9H4I0 556 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 FKRPQ9H9S5 495 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 XPNPEP3Q9NQH7 507 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 C14orf119Q9NWQ9 140 aa-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.83□□□□□ -2.54
RNU6-539P-201ENST00000516665 RALGAPA1Q6GYQ0 2036 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 ARPC4-TTLL3A0A0A6YYG9 625 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 SHISA9B4DS77 424 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 CLDN1O95832 211 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 EML2O95834 649 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 PLA2G4BP0C869 781 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 ALADP13716 330 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 BPIP17213 487 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 C5AR1P21730 350 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 USP8P40818 1118 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 WNT5AP41221 380 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 SOX3P41225 446 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 PTDSS1P48651 473 aaKnown RBP-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZNF136P52737 540 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 DGKQP52824 942 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 SLC16A1P53985 500 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 RPL24P83731 157 aaKnown RBP-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 STAT4Q14765 748 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 KIR2DS3Q14952 304 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 PLK5Q496M5 336 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZNF658BQ4V348 819 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 KCNT1Q5JUK3 1230 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 Q5W150 140 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 FAM90A2PQ658T7 463 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 ACSM6Q6P461 480 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 C1orf87Q8N0U7 546 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 DUSP19Q8WTR2 217 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 GLMPQ8WWB7 406 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 JADE3Q92613 823 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 TNIP3Q96KP6 325 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 CFAP57Q96MR6 1250 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 NEUROD6Q96NK8 337 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 PLEKHA3Q9HB20 300 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 ZSCAN32Q9NX65 697 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 OR6C3Q9NZP0 311 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 SEL1LQ9UBV2 794 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 TSPAN16Q9UKR8 245 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 PCDHA6Q9UN73 950 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 POLHQ9Y253 713 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 CARHSP1Q9Y2V2 147 aaKnown RBP-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 NAV2Q8IVL1 2488 aa-0.84□□□□□ -2.54
RNU6-539P-201ENST00000516665 GON4LQ3T8J9 2241 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 M0QZQ0 153 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 SOCS6O14544 535 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 CLIC2O15247 247 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 HSPA12AO43301 675 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 ULK1O75385 1050 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 PIAS2O75928 621 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 RPLP2P05387 115 aaKnown RBP-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 DCTDP32321 178 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 TMPOP42166 694 aaKnown RBP-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 PPOXP50336 477 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 RHAGQ02094 409 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 CALCOCO2Q13137 446 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 CTBP1Q13363 440 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 C2orf27AQ580R0 203 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 RNLSQ5VYX0 342 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 WDR73Q6P4I2 378 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 TRIM74Q86UV6 250 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 TRIM73Q86UV7 250 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 WDR63Q8IWG1 891 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 JPH2Q9BR39 696 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 OSBPL5Q9H0X9 879 aaPredicted RBP-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms