RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SAP30BPQ9UHR5 308 aaKnown RBP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 VPS51Q9UID3 782 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 ACAD8Q9UKU7 415 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 TRPC5Q9UL62 973 aaPredicted RBP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 RAB26Q9ULW5 256 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 CARHSP1Q9Y2V2 147 aaKnown RBP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 GPR45Q9Y5Y3 372 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 PTCH2Q9Y6C5 1203 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 BAHCC1Q9P281 2608 aa-0.73□□□□□ -2.53
RNU6-542P-201ENST00000516405 DMBT1Q9UGM3 2413 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 GTF3C1Q12789 2109 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 DUXAA6NLW8 204 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 TMEM233B4DJY2 109 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 CLPTM1O96005 669 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 HPP00738 406 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 MMP2P08253 660 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 HMBSP08397 361 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 PLA2G4BP0C869 781 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 WNT5AP41221 380 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 SOX3P41225 446 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ITGA8P53708 1063 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 SHC2P98077 582 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 TBL3Q12788 808 aaKnown RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ITGADQ13349 1161 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ACOX1Q15067 660 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 PTPN21Q16825 1174 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ATP13A5Q4VNC0 1218 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 PPP4R3AQ6IN85 833 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ARMCX5Q6P1M9 558 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ACSM6Q6P461 480 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 FAM122CQ6P4D5 195 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 KLHL24Q6TFL4 600 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 HEATR3Q7Z4Q2 680 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 TTC7BQ86TV6 843 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 SLC25A42Q86VD7 318 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 VPS37DQ86XT2 251 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 MMAAQ8IVH4 418 aaKnown RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ADGRF3Q8IZF5 1079 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ZBTB34Q8NCN2 500 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 OR52L2PQ8NGH6 319 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ABTB1Q969K4 478 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 CFAP57Q96MR6 1250 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 PRICKLE1Q96MT3 831 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 HIST1H2AAQ96QV6 131 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 LHPPQ9H008 270 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 HIPK3Q9H422 1215 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 ACTR5Q9H9F9 607 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 FKRPQ9H9S5 495 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 PPANQ9NQ55 473 aaKnown RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 FSCN3Q9NQT6 498 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 MAP3K20Q9NYL2 800 aaKnown RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 MAGEC2Q9UBF1 373 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 TSPAN16Q9UKR8 245 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 SDK2Q58EX2 2172 aa-0.74□□□□□ -2.53
RNU6-542P-201ENST00000516405 SHISA9B4DS77 424 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 H7C4K7 107 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 MYO1CO00159 1063 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 RRP9O43818 475 aaKnown RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 CLDN1O95832 211 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 TYRP14679 529 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 ZNF823P16415 610 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 ERCC3P19447 782 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 CD34P28906 385 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 ID4P47928 161 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 PPOXP50336 477 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 B3GALT5-AS1P59052 145 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 RPL24P83731 157 aaKnown RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 GAGE5Q13069 117 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 GAGE6Q13070 117 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 CALCOCO2Q13137 446 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 NOGQ13253 232 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 CNN3Q15417 329 aaKnown RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 KRTAP21-3Q3LHN1 58 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 ZNF658BQ4V348 819 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 ARL13AQ5H913 290 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 KCNT1Q5JUK3 1230 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 RNLSQ5VYX0 342 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 FAM90A2PQ658T7 463 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 TTC19Q6DKK2 380 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 RASGRP3Q8IV61 690 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 WDR63Q8IWG1 891 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 TMEM61Q8N0U2 210 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 C1orf87Q8N0U7 546 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 GLMPQ8WWB7 406 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 NEUROD6Q96NK8 337 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 RAD21L1Q9H4I0 556 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 PLSCR3Q9NRY6 295 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 OR6C3Q9NZP0 311 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 SEL1LQ9UBV2 794 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 FEZ2Q9UHY8 353 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 WIF1Q9Y5W5 379 aa-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 ZFP37Q9Y6Q3 630 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-542P-201ENST00000516405 COL6A6A6NMZ7 2263 aa-0.76□□□□□ -2.53
RNU6-542P-201ENST00000516405 IGKV2D-24A0A075B6R9 120 aa-0.76□□□□□ -2.53
RNU6-542P-201ENST00000516405 SHISA7A6NL88 538 aa-0.76□□□□□ -2.53
RNU6-542P-201ENST00000516405 MAGEB17A8MXT2 336 aa-0.76□□□□□ -2.53
RNU6-542P-201ENST00000516405 A8MZ25 164 aa-0.76□□□□□ -2.53
RNU6-542P-201ENST00000516405 M0QZQ0 153 aa-0.76□□□□□ -2.53
RNU6-542P-201ENST00000516405 SOCS6O14544 535 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms