RNA–Protein interactions for RNA: ENST00000516319.1

SNORD27.1-201, Transcript of small nucleolar RNA, C/D box 27, humanhuman

BASIC

Gene SNORD27, Length 72 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD27.1-201ENST00000516319 SLC25A10Q9UBX3 287 aaPredicted RBP3.32□□□□□ -1.88
SNORD27.1-201ENST00000516319 CDC14AQ9UNH5 594 aa3.32□□□□□ -1.88
SNORD27.1-201ENST00000516319 SNX9Q9Y5X1 595 aa3.32□□□□□ -1.88
SNORD27.1-201ENST00000516319 CKAP5Q14008 2032 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 TRIP12Q14669 1992 aaPredicted RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 IGLV5-52A0A0A0MRZ9 124 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 A6NLC8 198 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 NPIPB11E5RHQ5 1161 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 HSPA12AO43301 675 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 SEC31AO94979 1220 aaKnown RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 HEXAP06865 529 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 G6PDP11413 515 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 FGF3P11487 239 aaPredicted RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ATP1A3P13637 1013 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ITGAXP20702 1163 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 HARS2P49590 506 aaKnown RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 CTCFP49711 727 aaPredicted RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 COMPP49747 757 aaPredicted RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ART1P52961 327 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 NEXNQ0ZGT2 675 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ST3GAL1Q11201 340 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 CAMK1Q14012 370 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 SF3B4Q15427 424 aaKnown RBP eCLIP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 EFNB3Q15768 340 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 DCAF6Q58WW2 860 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 XKR9Q5GH70 373 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 RHBDF2Q6PJF5 856 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 B3GNT6Q6ZMB0 384 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 CCDC129Q6ZRS4 1044 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 H1FNTQ75WM6 255 aaPredicted RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ARMC9Q7Z3E5 817 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ZC3HC1Q86WB0 502 aaKnown RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 NR2C2APQ86WQ0 139 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ADHFE1Q8IWW8 467 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 SLC35F3Q8IY50 421 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ZCCHC9Q8N567 271 aaKnown RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 C11orf65Q8NCR3 313 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 RND1Q92730 232 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ZUFSPQ96AP4 578 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 OTULINQ96BN8 352 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 ZNF570Q96NI8 536 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 GLIS2Q9BZE0 524 aaPredicted RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 PAIP1Q9H074 479 aaKnown RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 TKTL2Q9H0I9 626 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 CD93Q9NPY3 652 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 PCDHB16Q9NRJ7 776 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 C9orf78Q9NZ63 289 aaPredicted RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 WWOXQ9NZC7 414 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 SELENONQ9NZV5 590 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 HCN3Q9P1Z3 774 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 SARDHQ9UL12 918 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 GTF2A1LQ9UNN4 478 aa3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 LSM4Q9Y4Z0 139 aaKnown RBP3.31□□□□□ -1.88
SNORD27.1-201ENST00000516319 CNTNAP2Q9UHC6 1331 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 CCDC189A1A4V9 331 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 CLEC18AA5D8T8 446 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 GAGE10A6NGK3 116 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 SRRM3A6NNA2 597 aaPredicted RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 MTA2O94776 668 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 PPP1R3DO95685 299 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 MT-CYBP00156 380 aaPredicted RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 CYC1P08574 325 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 COX7A2P14406 83 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 RRP1P56182 461 aaKnown RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 SORDQ00796 357 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 KIF5AQ12840 1032 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 RNPS1Q15287 305 aaKnown RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 COL28A1Q2UY09 1125 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 EIF2S3LQ2VIR3 472 aaKnown RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 SETMARQ53H47 684 aaPredicted RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 C9orf57Q5W0N0 161 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 WDR73Q6P4I2 378 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 KLHL24Q6TFL4 600 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 C16orf82Q7Z2V1 217 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 RBM23Q86U06 439 aaKnown RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 RBMXL3Q8N7X1 1067 aaKnown RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 CLEC18CQ8NCF0 446 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 SMRP1Q8NCR6 262 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 CADM4Q8NFZ8 388 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 LILRB1Q8NHL6 650 aaPredicted RBP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 FBXL8Q96CD0 374 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 RTP4Q96DX8 246 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 MTBPQ96DY7 904 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 ADGRG7Q96K78 797 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 AGXT2Q9BYV1 514 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 USP44Q9H0E7 712 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 IL25Q9H293 177 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 RETREG1Q9H6L5 497 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 MAGEE1Q9HCI5 957 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 WASH6PQ9NQA3 447 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 SMYD2Q9NRG4 433 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 PLSCR4Q9NRQ2 329 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 RCOR1Q9UKL0 485 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 CYP46A1Q9Y6A2 500 aa3.3□□□□□ -1.88
SNORD27.1-201ENST00000516319 LOC102724159A0A0B4J2E5 919 aa3.29□□□□□ -1.88
SNORD27.1-201ENST00000516319 PLEKHD1A6NEE1 506 aa3.29□□□□□ -1.88
SNORD27.1-201ENST00000516319 IFITM10A6NMD0 228 aa3.29□□□□□ -1.88
SNORD27.1-201ENST00000516319 TNFSF14O43557 240 aa3.29□□□□□ -1.88
SNORD27.1-201ENST00000516319 CREB3O43889 395 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms