RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ZNF814B7Z6K7 855 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 TP73O15350 636 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 UGDHO60701 494 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 DKC1O60832 514 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 ERAL1O75616 437 aaKnown RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 NDUFB4O95168 129 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 GABRB1P18505 474 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 ITGAXP20702 1163 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 SHMT1P34896 483 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 ACTN2P35609 894 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 BUD31P41223 144 aaPredicted RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 CXCR3P49682 368 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 IFI35P80217 286 aaPredicted RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 FRG1Q14331 258 aaKnown RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 LPIN1Q14693 890 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 TRIP6Q15654 476 aaKnown RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 TWIST1Q15672 202 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 HSPB2Q16082 182 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 NTRK2Q16620 822 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 CCDC96Q2M329 555 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 SMTNL2Q2TAL5 461 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 SGO1Q5FBB7 561 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 Q5PR19 223 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 C6orf10Q5SRN2 563 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 C10orf25Q5T742 122 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 MFSD4BQ5TF39 518 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 GARNL3Q5VVW2 1013 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 KRT79Q5XKE5 535 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 HEPHL1Q6MZM0 1159 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 GGNQ86UU5 652 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 ADGRG3Q86Y34 549 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 DHX40Q8IX18 779 aaKnown RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 GJC3Q8NFK1 279 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 CMASQ8NFW8 434 aaPredicted RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 LRRC59Q96AG4 307 aaKnown RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 MSI2Q96DH6 328 aaKnown RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 OR2A14Q96R47 310 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 SH3GL2Q99962 352 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 SLF1Q9BQI6 1058 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 TMEM79Q9BSE2 394 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 TRMOQ9BU70 441 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 TXLNGYQ9BZA5 131 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 R3HDMLQ9H3Y0 253 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 MAGIXQ9H6Y5 334 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 POLR1BQ9H9Y6 1135 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 MAGEE1Q9HCI5 957 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 RRP7BPQ9NSQ0 103 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 SEC63Q9UGP8 760 aaKnown RBP3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 MKLN1Q9UL63 735 aa3.42□□□□□ -1.86
RNU6-390P-201ENST00000516259 SMIM35A0A1B0GVV1 85 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 TYW5A2RUC4 315 aaKnown RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 DDTLA6NHG4 134 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 MANSC4A6NHS7 340 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SH2B2O14492 632 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 P4HA2O15460 535 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 ZNF500O60304 480 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 HNRNPCL1O60812 293 aaKnown RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RBMXL2O75526 392 aaKnown RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 BEST1O76090 585 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RB1P06400 928 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 ETFAP13804 333 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 GNLYP22749 145 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 MCM3P25205 808 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 HOXC9P31274 260 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RFC1P35251 1148 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SSBP2P81877 361 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 MRPS5P82675 430 aaKnown RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 POU5F1Q01860 360 aaKnown RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 LRMPQ12912 555 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RUNX2Q13950 521 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 PCLAFQ15004 111 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 DUSP6Q16828 381 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 ASTE1Q2TB18 679 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 CEP78Q5JTW2 689 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SPECC1Q5M775 1068 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RARS2Q5T160 578 aaKnown RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 GPR139Q6DWJ6 353 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SLC30A6Q6NXT4 461 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 CFAP77Q6ZQR2 320 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SEPT14Q6ZU15 432 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RD3Q7Z3Z2 195 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 TEX11Q8IYF3 940 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 ZCCHC9Q8N567 271 aaKnown RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SCCPDHQ8NBX0 429 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RASSF8Q8NHQ8 419 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SLC35F5Q8WV83 523 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 ATOH1Q92858 354 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 TMEM18Q96B42 140 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 HARBI1Q96MB7 349 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 WDFY2Q96P53 400 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 BBS4Q96RK4 519 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 SIN3AQ96ST3 1273 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 YME1L1Q96TA2 773 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 WDR77Q9BQA1 342 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 TMEM47Q9BQJ4 181 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 MAP6D1Q9H9H5 199 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 RANGRFQ9HD47 186 aaPredicted RBP3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 FZD3Q9NPG1 666 aa3.41□□□□□ -1.86
RNU6-390P-201ENST00000516259 PSD3Q9NYI0 1048 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms