RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PTAR1Q7Z6K3 402 aaPredicted RBP15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 GALNT7Q86SF2 657 aa15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 CEP97Q8IW35 865 aa15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 C7orf61Q8IZ16 206 aa15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 DDI1Q8WTU0 396 aa15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 LRRC37BQ96QE4 947 aa15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 TDRD1Q9BXT4 1180 aaKnown RBP15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 NMRAL1Q9HBL8 299 aa15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 DNMT3BQ9UBC3 853 aaKnown RBP15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 VPS51Q9UID3 782 aa15.54■□□□□ 0.08
THUMPD3-210ENST00000515662 LEFTY2O00292 366 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 PRLP01236 227 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 STMN1P16949 149 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 AVPR1AP37288 418 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 NSUN2Q08J23 767 aaKnown RBP eCLIP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 ZNF789Q5FWF6 425 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 LCA5Q86VQ0 697 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 CILP2Q8IUL8 1156 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 MFN1Q8IWA4 741 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 ELMO2Q96JJ3 720 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 DNAJC1Q96KC8 554 aaKnown RBP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 SMG9Q9H0W8 520 aaKnown RBP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 MYLK2Q9H1R3 596 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 TLR9Q9NR96 1032 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 LHX3Q9UBR4 397 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 RIMKLBQ9ULI2 386 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 SPO11Q9Y5K1 396 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 RAI2Q9Y5P3 530 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 G3V2L1 256 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 BUD23O43709 281 aaKnown RBP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 SERPINE1P05121 402 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 HSPA1AP0DMV8 641 aaKnown RBP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 HSPA1BP0DMV9 641 aaKnown RBP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 COL6A2P12110 1019 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 CRABP2P29373 138 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 ARFIP2P53365 341 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 TAS2R39P59534 338 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 PTPRCAPQ14761 206 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 MPP7Q5T2T1 576 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 CYB5D1Q6P9G0 228 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 CRLF3Q8IUI8 442 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 LMNTD2Q8IXW0 634 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 GPATCH11Q8N954 259 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 DCAF4L2Q8NA75 395 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 ERP27Q96DN0 273 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 TBATAQ96M53 351 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 OMDQ99983 421 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 C17orf80Q9BSJ5 609 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 TMEM120AQ9BXJ8 343 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 SUDS3Q9H7L9 328 aaPredicted RBP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 MARCH4Q9P2E8 410 aaPredicted RBP15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 ACOT9Q9Y305 439 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 PCDHGC4Q9Y5F7 938 aa15.53■□□□□ 0.08
THUMPD3-210ENST00000515662 LINC01553A4QN01 128 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 OR51F1A6NGY5 319 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 DNAJC8O75937 253 aaPredicted RBP15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 PDHA1P08559 390 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 CLCN5P51795 746 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 EPHA5P54756 1037 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 POU4F1Q01851 419 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 ZNF460Q14592 562 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 MPPE1Q53F39 396 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 CENPLQ8N0S6 344 aaPredicted RBP15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 SHKBP1Q8TBC3 707 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 RMDN1Q96DB5 314 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 ARHGAP26Q9UNA1 814 aa15.52■□□□□ 0.08
THUMPD3-210ENST00000515662 CCDC162PA2VCL2 907 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 ITM2AO43736 263 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 RFPL2O75678 378 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 RPP40O75818 363 aaKnown RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 APOA4P06727 396 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 RALBP11234 206 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 SYN1P17600 705 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 GRK2P25098 689 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 SLC1A6P48664 564 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 RBM20Q5T481 1227 aaKnown RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 NCEH1Q6PIU2 408 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 SPRED2Q7Z698 418 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 APCDD1Q8J025 514 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 PNPLA1Q8N8W4 532 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 OR6Y1Q8NGX8 325 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 STYXQ8WUJ0 223 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 KCTD4Q8WVF5 259 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 TSNARE1Q96NA8 513 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 TASP1Q9H6P5 420 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 ECT2Q9H8V3 914 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 MAN1C1Q9NR34 630 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 CRTAMO95727 393 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 S1PR4O95977 384 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 MT-CO1P00395 513 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 GOT2P00505 430 aaKnown RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 GPR158Q5T848 1215 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 TPGS1Q6ZTW0 290 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 CCDC91Q7Z6B0 441 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 LDB1Q86U70 411 aaPredicted RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 ARID3BQ8IVW6 561 aaPredicted RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 TMEM151AQ8N4L1 468 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 OR13C4Q8NGS5 318 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 MICAL1Q8TDZ2 1067 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 TCEAL4Q96EI5 215 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms