RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 PDK1Q15118 436 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 TEAD4Q15561 434 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 UGP2Q16851 508 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 HLA-BQ31612 363 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 TFDP3Q5H9I0 405 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 PSAPL1Q6NUJ1 521 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 GCNT7Q6ZNI0 430 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 PTAR1Q7Z6K3 402 aaPredicted RBP9.79□□□□□ -0.84
RACK1-234ENST00000515417 ZC3H18Q86VM9 953 aaKnown RBP9.79□□□□□ -0.84
RACK1-234ENST00000515417 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 LRRC49Q8IUZ0 686 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 BBS5Q8N3I7 341 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 CCDC112Q8NEF3 446 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 EXD1Q8NHP7 514 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 CXorf40AQ8TE69 158 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 HDAC11Q96DB2 347 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 RBM41Q96IZ5 413 aaKnown RBP9.79□□□□□ -0.84
RACK1-234ENST00000515417 FEM1CQ96JP0 617 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 ZNF641Q96N77 438 aaPredicted RBP9.79□□□□□ -0.84
RACK1-234ENST00000515417 TSGA13Q96PP4 275 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 NUDCD1Q96RS6 583 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 SLC17A9Q9BYT1 436 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 BRD8Q9H0E9 1235 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 GAREM1Q9H706 876 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 AMFRQ9UKV5 643 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 ATP8A1Q9Y2Q0 1164 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.79□□□□□ -0.84
RACK1-234ENST00000515417 PCDHA3Q9Y5H8 950 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 ADAMTS9Q9P2N4 1935 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 CABIN1Q9Y6J0 2220 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 SHROOM3Q8TF72 1996 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 PLXNA2O75051 1894 aa9.79□□□□□ -0.84
RACK1-234ENST00000515417 DOCK9Q9BZ29 2069 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 RIOK3O14730 519 aaKnown RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 DDX3YO15523 660 aaKnown RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 TSPAN6O43657 245 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 OPHN1O60890 802 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 PAK4O96013 591 aaPredicted RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 CPP00450 1065 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 PDHA1P08559 390 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 CTPS1P17812 591 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 AKT2P31751 481 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 MMP12P39900 470 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 LIG3P49916 1009 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 LIMK1P53667 647 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 RWDD2BP57060 319 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 RPS21P63220 83 aaKnown RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 IFI35P80217 286 aaPredicted RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 NSUN2Q08J23 767 aaKnown RBP eCLIP9.78□□□□□ -0.84
RACK1-234ENST00000515417 RALGDSQ12967 914 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 SGCGQ13326 291 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 HNRNPDQ14103 355 aaKnown RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 GRM3Q14832 879 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 PRKD1Q15139 912 aaPredicted RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 PPP2R5EQ16537 467 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 TPRG1LQ5T0D9 272 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 CCDC181Q5TID7 509 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 KIAA1161Q6NSJ0 714 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 TIGD7Q6NT04 549 aaPredicted RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 BRAT1Q6PJG6 821 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 BBS12Q6ZW61 710 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 SPATS2Q86XZ4 545 aaKnown RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 TXLNBQ8N3L3 684 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 CNTD1Q8N815 330 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 TMEM145Q8NBT3 493 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 DEFB124Q8NES8 71 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 OR13H1Q8NG92 308 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 ARRDC2Q8TBH0 407 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 RAB7BQ96AH8 199 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 ECHDC3Q96DC8 303 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 CAMK1GQ96NX5 476 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 AGAP3Q96P47 875 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 C1QTNF2Q9BXJ5 285 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 POLR1EQ9GZS1 481 aaKnown RBP9.78□□□□□ -0.84
RACK1-234ENST00000515417 KCNF1Q9H3M0 494 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 B4GALT6Q9UBX8 382 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 ZMIZ1Q9ULJ6 1067 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 DMTF1Q9Y222 760 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 PCDHB9Q9Y5E1 797 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 RAI2Q9Y5P3 530 aa9.78□□□□□ -0.84
RACK1-234ENST00000515417 NBEAQ8NFP9 2946 aa9.77□□□□□ -0.84
RACK1-234ENST00000515417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.77□□□□□ -0.85
RACK1-234ENST00000515417 TCRBV7S2A1N4TA0A589 114 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 CCDC66A2RUB6 948 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 POM121BA6NF01 834 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 PRAMEF26H0Y7S4 382 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 TLR4O00206 839 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 PPP1R12AO14974 1030 aaPredicted RBP9.77□□□□□ -0.85
RACK1-234ENST00000515417 VILLO15195 856 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 HTRA2O43464 458 aaPredicted RBP9.77□□□□□ -0.85
RACK1-234ENST00000515417 PGLSO95336 258 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 MMP2P08253 660 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 ALPIP09923 528 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 CCDC175P0C221 793 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 THEGLP0DJG4 465 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 C6P13671 934 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 CD59P13987 128 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 TGM2P21980 687 aa9.77□□□□□ -0.85
RACK1-234ENST00000515417 HNRNPA2B1P22626 353 aaKnown RBP9.77□□□□□ -0.85
RACK1-234ENST00000515417 PTPN3P26045 913 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms