RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 FAM182AQ5T1J6 154 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 FAXCQ5TGI0 409 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 IZUMO3Q5VZ72 239 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 DENND5AQ6IQ26 1287 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 LRRC8BQ6P9F7 803 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 PPP1R21Q6ZMI0 780 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 MMAAQ8IVH4 418 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 RAVER1Q8IY67 606 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 NDUFAF2Q8N183 169 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 IPMKQ8NFU5 416 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.06□□□□□ -0.488e-7■■■■■ 60.7
PDLIM5-220ENST00000514830 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 ART4Q93070 314 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 IFT43Q96FT9 208 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 SCRN2Q96FV2 425 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 KLHL32Q96NJ5 620 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 MCCC1Q96RQ3 725 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 TBL1YQ9BQ87 522 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 FSD1LQ9BXM9 530 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 FOXP3Q9BZS1 431 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 XAB2Q9HCS7 855 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 CASS4Q9NQ75 786 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 GDF3Q9NR23 364 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 UBP1Q9NZI7 540 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 FZD4Q9ULV1 537 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 CACNA1IQ9P0X4 2223 aa12.06□□□□□ -0.48
PDLIM5-220ENST00000514830 A0A0J9YYE9 177 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TCRBV21S2A2A0A5A6 115 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 C16orf96A6NNT2 1141 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 UPK3BL1B0FP48 263 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 UPK3BL2E5RIL1 263 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 KPNA3O00505 521 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 AREL1O15033 823 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 PPFIA2O75334 1257 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TMEM63AO94886 807 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 APBB3O95704 486 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 CPP00450 1065 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TRBC1P01850 177 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 DNTTP04053 509 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 PDHA1P08559 390 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TIMP2P16035 220 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 DRD3P35462 400 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TNNT3P45378 269 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 CXCL12P48061 93 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 PSMD8P48556 350 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 NEK3P51956 506 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 SLC7A5Q01650 507 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 GUCY2DQ02846 1103 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 CDH17Q12864 832 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 UGP2Q16851 508 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TTC31Q49AM3 519 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 SIRPB2Q5JXA9 342 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TEX35Q5T0J7 233 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 ANKRD22Q5VYY1 191 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 ZNF534Q76KX8 674 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 ERN2Q76MJ5 926 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 PARS2Q7L3T8 475 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 ZSWIM9Q86XI8 627 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 IFT20Q8IY31 132 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 AADATQ8N5Z0 425 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TSTD1Q8NFU3 115 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 ARRDC3Q96B67 414 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 SIPA1Q96FS4 1042 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 FICDQ9BVA6 458 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 MAGEE1Q9HCI5 957 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 ITM2CQ9NQX7 267 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 C2orf42Q9NWW7 574 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 HACD3Q9P035 362 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 USP36Q9P275 1121 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 ANAPC5Q9UJX4 755 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 CHKBQ9Y259 395 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 SNX24Q9Y343 169 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 RIF1Q5UIP0 2472 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-220ENST00000514830 TCRBV7S3A2A0A539 114 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 CAPN8A6NHC0 703 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 H0Y858 1186 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 K7ESF4 209 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 MID1O15344 667 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ZNF217O75362 1048 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 AGTP01019 485 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 TUBBP07437 444 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 TDGF1P13385 188 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ADRB3P13945 408 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 P2RY2P41231 377 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 NPY2RP49146 381 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 LMAN1P49257 510 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ITGA8P53708 1063 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 MRPS25P82663 173 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 ELP6Q0PNE2 266 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 TCF15Q12870 199 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 PCSK7Q16549 785 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 QPCTQ16769 361 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 CFAP58Q5T655 872 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 PIP5KL1Q5T9C9 394 aa12.04□□□□□ -0.48
PDLIM5-220ENST00000514830 AGBL4Q5VU57 503 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms