RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 KCNE4Q8WWG9 221 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 GLMNQ92990 594 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 NAT6Q93015 286 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 SLC46A1Q96NT5 459 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 PEBP4Q96S96 227 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 DHX35Q9H5Z1 703 aaKnown RBP12.31□□□□□ -0.44
SNHG4-208ENST00000514110 PADI4Q9UM07 663 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 AP4E1Q9UPM8 1137 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 LRP4O75096 1905 aa12.31□□□□□ -0.44
SNHG4-208ENST00000514110 ARHGAP42A6NI28 874 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 TMEM110-MUSTN1A8MSY1 372 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 TCEA3O75764 348 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 PCCBP05166 539 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 CTSEP14091 401 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 PSMA2P25787 234 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 BLKP51451 505 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 SRP54P61011 504 aaKnown RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 C19orf57Q0VDD7 668 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 NFATC4Q14934 902 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 AGERQ15109 404 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 ELOCQ15369 112 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 ERMARDQ5T6L9 678 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 AFMIDQ63HM1 303 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 PLEKHA7Q6IQ23 1121 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 ESRP1Q6NXG1 681 aaKnown RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 BRAT1Q6PJG6 821 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 ENPP7Q6UWV6 458 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 ARHGAP36Q6ZRI8 547 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 CYP4V2Q6ZWL3 525 aaPredicted RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 RD3Q7Z3Z2 195 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 SRLQ86TD4 932 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 ARHGAP12Q8IWW6 846 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 FSTL5Q8N475 847 aaPredicted RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 AOPEPQ8N6M6 819 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 PLA2G15Q8NCC3 412 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 TSEN2Q8NCE0 465 aaKnown RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 LSM14AQ8ND56 463 aaKnown RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 PCDH19Q8TAB3 1148 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 GRAMD1AQ96CP6 724 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 ZNF641Q96N77 438 aaPredicted RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 KCTD15Q96SI1 283 aaPredicted RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 APOOQ9BUR5 198 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 SNRNP25Q9BV90 132 aaKnown RBP12.3□□□□□ -0.44
SNHG4-208ENST00000514110 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 TRIM7Q9C029 511 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 THSD1Q9NS62 852 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 PARVAQ9NVD7 372 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 SIRPGQ9P1W8 387 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 GULP1Q9UBP9 304 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 PCSK1NQ9UHG2 260 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
SNHG4-208ENST00000514110 RP1P56715 2156 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 NTN3O00634 580 aaPredicted RBP12.29□□□□□ -0.44
SNHG4-208ENST00000514110 KLK10O43240 276 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 PALMO75781 387 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 RASGRP1O95267 797 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 CCDC172P0C7W6 258 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 DESP17661 470 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 TNFAIP3P21580 790 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 RBMS1P29558 406 aaKnown RBP12.29□□□□□ -0.44
SNHG4-208ENST00000514110 CSNK1DP48730 415 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 TMPRSS3P57727 454 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 SKOR1P84550 965 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 RALGDSQ12967 914 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 SPIDRQ14159 915 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 CFAP58Q5T655 872 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 ARHGAP40Q5TG30 622 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 BROXQ5VW32 411 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 ERAP2Q6P179 960 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 FOXR1Q6PIV2 292 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 LVRNQ6Q4G3 990 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 TP53INP2Q8IXH6 220 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 NPWQ8N729 165 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 ARL10Q8N8L6 244 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 CCDC74AQ96AQ1 378 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 TUBGCP5Q96RT8 1024 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNHG4-208ENST00000514110 DPH1Q9BZG8 443 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 ATP13A3Q9H7F0 1226 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 SYNDIG1Q9H7V2 258 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 DONSONQ9NYP3 566 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 MYO6Q9UM54 1294 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 GPR34Q9UPC5 381 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 DOLKQ9UPQ8 538 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 ATP8A1Q9Y2Q0 1164 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 PCDHGA8Q9Y5G5 932 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 ANKRD36A6QL64 1941 aa12.29□□□□□ -0.44
SNHG4-208ENST00000514110 TMEM191CA6NGB0 347 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 LRRC53A6NM62 1247 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 EIF3CLB5ME19 914 aaKnown RBP12.28□□□□□ -0.44
SNHG4-208ENST00000514110 DFFAO00273 331 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 DAPK3O43293 454 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 RECQL5O94762 991 aaPredicted RBP12.28□□□□□ -0.44
SNHG4-208ENST00000514110 ALPIP09923 528 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 GM2AP17900 193 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 ERCC2P18074 760 aa12.28□□□□□ -0.44
SNHG4-208ENST00000514110 HTR1BP28222 390 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms