RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 HCAR2Q8TDS4 363 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM131CQ96AQ9 280 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ARRDC3Q96B67 414 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TADA1Q96BN2 335 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 LRRC45Q96CN5 670 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 ECHDC3Q96DC8 303 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 SPACA7Q96KW9 195 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 KLHL32Q96NJ5 620 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 RBM15Q96T37 977 aaKnown RBP eCLIP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 PRRX2Q99811 253 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 OMDQ99983 421 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TDRD1Q9BXT4 1180 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 HDAC8Q9BY41 377 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TPSD1Q9BZJ3 242 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 FBXL12Q9NXK8 326 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM153AQ9UHL3 310 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 NCKAP1Q9Y2A7 1128 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 RAI2Q9Y5P3 530 aa7.65□□□□□ -1.18
HMGXB3-204ENST00000513318 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 IGHV1OR15-9A0A0B4J2B8 117 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 TTC24A2A3L6 582 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 C16orf96A6NNT2 1141 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 ERI2A8K979 691 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 UPK3BL1B0FP48 263 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 UPK3BL2E5RIL1 263 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PSMD3O43242 534 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 FZD6O60353 706 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PMPCBO75439 489 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 RNASEH2AO75792 299 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PGLSO95336 258 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 MT-CYBP00156 380 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 CPP00450 1065 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 KRT14P02533 472 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 CCNYL3P0C7X3 344 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 ADRB3P13945 408 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 XPAP23025 273 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 OXTRP30559 389 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 P2RY2P41231 377 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 TNNT3P45378 269 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 GRIA4P48058 902 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PXNP49023 591 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 TPMTP51580 245 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 SUOXP51687 545 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 RPL26P61254 145 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 C2orf54Q08AI8 447 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 ELP6Q0PNE2 266 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 CNTN1Q12860 1018 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 DHX34Q14147 1143 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PPP1R7Q15435 360 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PARP6Q2NL67 630 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 POM121L1PQ3SYA9 428 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 USP39Q53GS9 565 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PIP5KL1Q5T9C9 394 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 AGBL4Q5VU57 503 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 FBXL19Q6PCT2 694 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 SYDE1Q6ZW31 735 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PRPF39Q86UA1 669 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 KLHL7Q8IXQ5 586 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 NDUFAF2Q8N183 169 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 HDDC3Q8N4P3 179 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 GLIS1Q8NBF1 620 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 MNS1Q8NEH6 495 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 SPATA22Q8NHS9 363 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 CCHCR1Q8TD31 782 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 GANCQ8TET4 914 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PDCD6IPQ8WUM4 868 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 NELL1Q92832 810 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 RAB7BQ96AH8 199 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 IFT43Q96FT9 208 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 OXNAD1Q96HP4 312 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 FEM1CQ96JP0 617 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 NSMCE3Q96MG7 304 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 FSD1LQ9BXM9 530 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 ADGRE3Q9BY15 652 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 BTBD1Q9H0C5 482 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 SGK2Q9HBY8 427 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 ITM2CQ9NQX7 267 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 EVA1BQ9NVM1 165 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 ZSCAN32Q9NX65 697 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 SERGEFQ9UGK8 458 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 CYP8B1Q9UNU6 501 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 RPL26L1Q9UNX3 145 aaKnown RBP7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PCDHB9Q9Y5E1 797 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 PCDHGC4Q9Y5F7 938 aa7.64□□□□□ -1.19
HMGXB3-204ENST00000513318 KNL1Q8NG31 2342 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 A0A0J9YYE9 177 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CTAGE15A4D2H0 777 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 E7EVH7 732 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 F5H423 210 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 PLRG1O43660 514 aaKnown RBP7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 AP1G1O43747 822 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 METTL18O95568 372 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 AP2A1O95782 977 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 NDST3O95803 873 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 EPOP01588 193 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 TRBC1P01850 177 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 FGF1P05230 155 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 SP9P0CG40 484 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 CTAGE8P0CG41 777 aa7.63□□□□□ -1.19
HMGXB3-204ENST00000513318 ETS1P14921 441 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms