RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 PCMTD1Q96MG8 357 aaPredicted RBP25.44■■□□□ 1.66
CLDND1-226ENST00000513287 NCAPGQ9BPX3 1015 aa25.44■■□□□ 1.66
CLDND1-226ENST00000513287 WRAP53Q9BUR4 548 aaKnown RBP25.44■■□□□ 1.66
CLDND1-226ENST00000513287 TMX2-CTNND1H3BSU7 103 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 C6P13671 934 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 EIF3IQ13347 325 aaKnown RBP25.43■■□□□ 1.66
CLDND1-226ENST00000513287 MTM1Q13496 603 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 LRRC73Q5JTD7 316 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 DCUN1D2Q6PH85 259 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 APTXQ7Z2E3 356 aaKnown RBP25.43■■□□□ 1.66
CLDND1-226ENST00000513287 CCDC3Q9BQI4 270 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 SYT11Q9BT88 431 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 APOOQ9BUR5 198 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 PCDH12Q9NPG4 1184 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 DGKBQ9Y6T7 804 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 LRP4O75096 1905 aa25.43■■□□□ 1.66
CLDND1-226ENST00000513287 CCDC187A0A096LP49 1063 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 ARHGAP42A6NI28 874 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 PRB1P04280 392 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 HOXC4P09017 264 aaPredicted RBP25.42■■□□□ 1.66
CLDND1-226ENST00000513287 MMP12P39900 470 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 ZNF135P52742 658 aaPredicted RBP25.42■■□□□ 1.66
CLDND1-226ENST00000513287 TPI1P60174 286 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 SPIDRQ14159 915 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 RFTN1Q14699 578 aaPredicted RBP25.42■■□□□ 1.66
CLDND1-226ENST00000513287 IRF2BP2Q7Z5L9 587 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 GKN2Q86XP6 184 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 PSTKQ8IV42 348 aaKnown RBP25.42■■□□□ 1.66
CLDND1-226ENST00000513287 SPOCK2Q92563 424 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 ECHDC3Q96DC8 303 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 SEPT11Q9NVA2 429 aaKnown RBP25.42■■□□□ 1.66
CLDND1-226ENST00000513287 PARVAQ9NVD7 372 aa25.42■■□□□ 1.66
CLDND1-226ENST00000513287 ATMQ13315 3056 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 KLK10O43240 276 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 BUB1BO60566 1050 aaPredicted RBP25.41■■□□□ 1.66
CLDND1-226ENST00000513287 PIGNO95427 931 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 CTSEP14091 401 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 PDX1P52945 283 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 VAC14Q08AM6 782 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 MAMLD1Q13495 774 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 INPP5AQ14642 412 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 ALG11Q2TAA5 492 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 AFMIDQ63HM1 303 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 PLEKHA7Q6IQ23 1121 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 SASS6Q6UVJ0 657 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 ZNF843Q8N446 348 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 NAF1Q96HR8 494 aaKnown RBP25.41■■□□□ 1.66
CLDND1-226ENST00000513287 DOLKQ9UPQ8 538 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 ATP8A1Q9Y2Q0 1164 aa25.41■■□□□ 1.66
CLDND1-226ENST00000513287 KIF26BQ2KJY2 2108 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 J3KR12 359 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 ITGA2BP08514 1039 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 HCAR3P49019 387 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 LIG3P49916 1009 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 SRP54P61011 504 aaKnown RBP25.4■■□□□ 1.66
CLDND1-226ENST00000513287 POLR2LP62875 67 aaKnown RBP25.4■■□□□ 1.66
CLDND1-226ENST00000513287 OGDHQ02218 1023 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 ERMARDQ5T6L9 678 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 ENPP7Q6UWV6 458 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 FNIP1Q8TF40 1166 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 EXOC2Q96KP1 924 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 RBM15Q96T37 977 aaKnown RBP eCLIP25.4■■□□□ 1.66
CLDND1-226ENST00000513287 HSD3B7Q9H2F3 369 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 ATP13A3Q9H7F0 1226 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 AP4E1Q9UPM8 1137 aa25.4■■□□□ 1.66
CLDND1-226ENST00000513287 COL6A6A6NMZ7 2263 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 TNFRSF10CO14798 259 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 PNLIPP16233 465 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 CDK11BP21127 795 aaKnown RBP25.39■■□□□ 1.66
CLDND1-226ENST00000513287 SERPINA4P29622 427 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 TRIM23P36406 574 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 CFHR1Q03591 330 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 NCAPHQ15003 741 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 CFAP58Q5T655 872 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 OGFOD3Q6PK18 319 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 SRLQ86TD4 932 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 HID1Q8IV36 788 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 NETO2Q8NC67 525 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 TSACCQ96A04 125 aaPredicted RBP25.39■■□□□ 1.66
CLDND1-226ENST00000513287 WDR92Q96MX6 357 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 SLC39A8Q9C0K1 460 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 ACSL6Q9UKU0 697 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 COQ6Q9Y2Z9 468 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 PCDHGA7Q9Y5G6 932 aa25.39■■□□□ 1.66
CLDND1-226ENST00000513287 CFAP46Q8IYW2 2715 aa25.39■■□□□ 1.65
CLDND1-226ENST00000513287 K7ENP7 123 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 PALMO75781 387 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 TNFP01375 233 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 GZMAP12544 262 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 ATP1A3P13637 1013 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 PAPOLAP51003 745 aaKnown RBP25.38■■□□□ 1.65
CLDND1-226ENST00000513287 KIAA1024LP59773 190 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 STX1AQ16623 288 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 INO80CQ6PI98 192 aaPredicted RBP25.38■■□□□ 1.65
CLDND1-226ENST00000513287 CAMK1DQ8IU85 385 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 GPR156Q8NFN8 814 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 PCDH19Q8TAB3 1148 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 CPNE5Q9HCH3 593 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 KLQ9UEF7 1012 aa25.38■■□□□ 1.65
CLDND1-226ENST00000513287 APPL1Q9UKG1 709 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms