RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ZNF438Q7Z4V0 828 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 TAF8Q7Z7C8 310 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 BMPERQ8N8U9 685 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 PLA2G15Q8NCC3 412 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 C1orf74Q96LT6 269 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 CPXM1Q96SM3 734 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 NPY6RQ99463 290 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 DDA1Q9BW61 102 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 TMEM168Q9H0V1 697 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 WDCPQ9H6R7 721 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 SPATS2LQ9NUQ6 558 aaKnown RBP11.29□□□□□ -0.6
RNF4-218ENST00000513284 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 ASNSD1Q9NWL6 643 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
RNF4-218ENST00000513284 DOCK4Q8N1I0 1966 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 CHD5Q8TDI0 1954 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 POLQO75417 2590 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 KRIT1O00522 736 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 CAPN5O15484 640 aaPredicted RBP11.28□□□□□ -0.6
RNF4-218ENST00000513284 LETM1O95202 739 aaPredicted RBP11.28□□□□□ -0.6
RNF4-218ENST00000513284 POP4O95707 220 aaKnown RBP11.28□□□□□ -0.6
RNF4-218ENST00000513284 FUCA1P04066 466 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 F8A1P23610 371 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 MPSTP25325 297 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 ALDH4A1P30038 563 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 PRCPP42785 496 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 MAZP56270 477 aaKnown RBP11.28□□□□□ -0.6
RNF4-218ENST00000513284 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 GNA12Q03113 381 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 MTA1Q13330 715 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 NR1D2Q14995 579 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 LRRC14Q15048 493 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 MAP9Q49MG5 647 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 TMEM52BQ4KMG9 183 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 EFHC1Q5JVL4 640 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 NKAIN2Q5VXU1 208 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 ANKS6Q68DC2 871 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 SPECC1LQ69YQ0 1117 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 GDPD4Q6W3E5 623 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 ZNF783Q6ZMS7 281 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 NRROSQ86YC3 692 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 RYBPQ8N488 228 aaPredicted RBP11.28□□□□□ -0.6
RNF4-218ENST00000513284 TEX19Q8NA77 164 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 NETO2Q8NC67 525 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 GALNT11Q8NCW6 608 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 GOLPH3LQ9H4A5 285 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 GPN2Q9H9Y4 310 aaPredicted RBP11.28□□□□□ -0.6
RNF4-218ENST00000513284 FGF22Q9HCT0 170 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 SLC39A1Q9NY26 324 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 TMEM9Q9P0T7 183 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 KLQ9UEF7 1012 aa11.28□□□□□ -0.6
RNF4-218ENST00000513284 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
RNF4-218ENST00000513284 B4DGG1 531 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 P4HA2O15460 535 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 HSF2BPO75031 334 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 SRGAP2O75044 1071 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 VPS4BO75351 444 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 FGF1P05230 155 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 FURINP09958 794 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 BMP6P22004 513 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 TNFRSF8P28908 595 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 GCNT1Q02742 428 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 SQSTM1Q13501 440 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 PNOCQ13519 176 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 MEA1Q16626 185 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 ATXN7L2Q5T6C5 722 aaPredicted RBP11.27□□□□□ -0.61
RNF4-218ENST00000513284 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 OLFML1Q6UWY5 402 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 LEKR1Q6ZMV7 388 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 FAM183BPQ6ZVS7 135 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 SRRM1Q8IYB3 904 aaKnown RBP11.27□□□□□ -0.61
RNF4-218ENST00000513284 EHBP1Q8NDI1 1231 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 OR2AP1Q8NGE2 309 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 CXorf40AQ8TE69 158 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 ARHGEF2Q92974 986 aaKnown RBP11.27□□□□□ -0.61
RNF4-218ENST00000513284 NT5C3BQ969T7 300 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 ARHGEF26Q96DR7 871 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 CEP63Q96MT8 703 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 WDR92Q96MX6 357 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 C1QTNF7Q9BXJ2 289 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 DPEP2Q9H4A9 486 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 ZNF768Q9H5H4 540 aaKnown RBP11.27□□□□□ -0.61
RNF4-218ENST00000513284 PRDM8Q9NQV8 689 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 CUEDC1Q9NWM3 386 aaPredicted RBP11.27□□□□□ -0.61
RNF4-218ENST00000513284 AKAP7Q9P0M2 348 aaPredicted RBP11.27□□□□□ -0.61
RNF4-218ENST00000513284 VPS4AQ9UN37 437 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 ST14Q9Y5Y6 855 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 MRPS18BQ9Y676 258 aaKnown RBP11.27□□□□□ -0.61
RNF4-218ENST00000513284 C2CD3Q4AC94 2353 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 ESPL1Q14674 2120 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 SHANK1Q9Y566 2161 aa11.27□□□□□ -0.61
RNF4-218ENST00000513284 BICDL2A1A5D9 508 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 B4E171 279 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 PPM1DO15297 605 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 INSIG1O15503 277 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 GSRP00390 522 aa11.26□□□□□ -0.61
RNF4-218ENST00000513284 ERBB2P04626 1255 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms