RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 HS3ST3A1Q9Y663 406 aa6.56□□□□□ -1.36
KDM3B-208ENST00000512928 CACNA1EQ15878 2313 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ADAMTS20P59510 1910 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 SPTY2D1-AS1A0A0U1RR47 76 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 GOLGA6L3A6NEY3 463 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 NEMP2A6NFY4 417 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 RIOK3O14730 519 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 AREL1O15033 823 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 SCAMP1O15126 338 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 SIGLEC6O43699 453 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 SPOPO43791 374 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 MAFKO60675 156 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 RFPL3O75679 317 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 PIAS2O75928 621 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 CPP00450 1065 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 KRT1P04264 644 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ELFN1P0C7U0 828 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 JUNDP17535 347 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 DGKAP23743 735 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 IGFALSP35858 605 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 HSPA9P38646 679 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 MMP12P39900 470 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 NOP2P46087 812 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 RXRGP48443 463 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 CSNK1DP48730 415 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 LIG3P49916 1009 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 SUOXP51687 545 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 CLDN6P56747 220 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 TAS2R40P59535 323 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 HNRNPKP61978 463 aaKnown RBP eCLIP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 POLR2LP62875 67 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 DYNLT1P63172 113 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 PTK2BQ14289 1009 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 FZD2Q14332 565 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 LRRC14Q15048 493 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ACOX1Q15067 660 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 PDK2Q15119 407 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ANKRD20A8PQ5CZ79 823 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 FAXCQ5TGI0 409 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 NCBP2-AS2Q69YL0 99 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 C19orf48Q6RUI8 117 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 RD3Q7Z3Z2 195 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ZSWIM9Q86XI8 627 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 DCP2Q8IU60 420 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 RHOT2Q8IXI1 618 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 GALNT15Q8N3T1 639 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 DENND6BQ8NEG7 585 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 PCDH19Q8TAB3 1148 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 FAM174AQ8TBP5 190 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 LMX1AQ8TE12 382 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 LRRN4Q8WUT4 740 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 TSC1Q92574 1164 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ZNF599Q96NL3 588 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 LENG8Q96PV6 779 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 PSKH2Q96QS6 385 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 KLF6Q99612 283 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ZNF670Q9BS34 389 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 MAK16Q9BXY0 300 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 SLC13A1Q9BZW2 595 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 MBNL1Q9NR56 388 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 HAUS2Q9NVX0 235 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 TOR4AQ9NXH8 423 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 RCOR3Q9P2K3 495 aaPredicted RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 APOBEC3BQ9UH17 382 aaKnown RBP6.55□□□□□ -1.36
KDM3B-208ENST00000512928 DOLKQ9UPQ8 538 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 ATP8A1Q9Y2Q0 1164 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 MSRB2Q9Y3D2 182 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 HYOU1Q9Y4L1 999 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 OR1A2Q9Y585 309 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 PCDHGC4Q9Y5F7 938 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 HEY1Q9Y5J3 304 aa6.55□□□□□ -1.36
KDM3B-208ENST00000512928 TSPAN11A1L157 253 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 TRIM38O00635 465 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 AQP9O43315 295 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 SOCS5O75159 536 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 MTA2O94776 668 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 IPO7O95373 1038 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 MYF5P13349 255 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 JUPP14923 745 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 NME1P15531 152 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 CKMT2P17540 419 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 CTPS1P17812 591 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 KDELR1P24390 212 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 IL4RP24394 825 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 NFKBIAP25963 317 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 HTR1BP28222 390 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 MAN1A1P33908 653 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 HNF1BP35680 557 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 GARSP41250 739 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 ACADVLP49748 655 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 EPHB1P54762 984 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 NAP1L1P55209 391 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 PFN3P60673 137 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 GBE1Q04446 702 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 NSUN2Q08J23 767 aaKnown RBP eCLIP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 C1orf61Q13536 156 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 ARHGEF7Q14155 803 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 INPP5AQ14642 412 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 GSE1Q14687 1217 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms