RNA–Protein interactions for RNA: ENST00000512797.5

RPS3A-211, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-211ENST00000512797 LRRC59Q96AG4 307 aaKnown RBP4.47□□□□□ -1.69
RPS3A-211ENST00000512797 TMEM18Q96B42 140 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 UPB1Q9UBR1 384 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 KIAA0232Q92628 1395 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 NPC1L1Q9UHC9 1359 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 NINLQ9Y2I6 1382 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 BCL9LQ86UU0 1499 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 ADAMTS7Q9UKP4 1686 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 THSD7AQ9UPZ6 1657 aa4.47□□□□□ -1.69
RPS3A-211ENST00000512797 NPHP3Q7Z494 1330 aa4.46□□□□□ -1.69
RPS3A-211ENST00000512797 SLIT2O94813 1529 aa4.46□□□□□ -1.69
RPS3A-211ENST00000512797 DOT1LQ8TEK3 1739 aa4.46□□□□□ -1.69
RPS3A-211ENST00000512797 COL5A2P05997 1499 aaPredicted RBP4.46□□□□□ -1.7
RPS3A-211ENST00000512797 CDK12Q9NYV4 1490 aaPredicted RBP4.46□□□□□ -1.7
RPS3A-211ENST00000512797 FAM90A20PA6NIJ5 464 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 C17orf100A8MU93 164 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 KDM4EB2RXH2 506 aaPredicted RBP4.46□□□□□ -1.7
RPS3A-211ENST00000512797 TOM1O60784 492 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 SERPINI2O75830 405 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 ACP5P13686 325 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 SERPINF1P36955 418 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 MXI1P50539 228 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 RPS6KA3P51812 740 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 DGAT2L7PQ6IED9 249 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 PGBD2Q6P3X8 592 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 KLHL17Q6TDP4 642 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 ATG16L2Q8NAA4 619 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 IGSF21Q96ID5 467 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 TRAPPC9Q96Q05 1148 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 ELAC2Q9BQ52 826 aaKnown RBP4.46□□□□□ -1.7
RPS3A-211ENST00000512797 MSTO1Q9BUK6 570 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 GAREM1Q9H706 876 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 TERF2IPQ9NYB0 399 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 NDUFAF4Q9P032 175 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 MEGF6O75095 1541 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 TTC21AQ8NDW8 1320 aa4.46□□□□□ -1.7
RPS3A-211ENST00000512797 C5P01031 1676 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 TUBGCP6Q96RT7 1819 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 SOCS5O75159 536 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 KRT36O76013 467 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 IGLV2-11P01706 119 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 TCEA1P23193 301 aaKnown RBP4.45□□□□□ -1.7
RPS3A-211ENST00000512797 SERPINB3P29508 390 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 C21orf33P30042 268 aaPredicted RBP4.45□□□□□ -1.7
RPS3A-211ENST00000512797 HOXC9P31274 260 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 PDCLQ13371 301 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 SULT6B1Q6IMI4 303 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 TEFMQ96QE5 360 aaKnown RBP4.45□□□□□ -1.7
RPS3A-211ENST00000512797 HERC2P3Q9BVR0 1158 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 NPFFR1Q9GZQ6 430 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 THAP1Q9NVV9 213 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 DONSONQ9NYP3 566 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 NLKQ9UBE8 527 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 KNSTRNQ9Y448 316 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 NCAPD2Q15021 1401 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 KDM3BQ7LBC6 1761 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 CASZ1Q86V15 1759 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 CGNL1Q0VF96 1302 aa4.45□□□□□ -1.7
RPS3A-211ENST00000512797 BTAF1O14981 1849 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 TAF1LQ8IZX4 1826 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 TNS1Q9HBL0 1735 aaKnown RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 A0A0B4J293 547 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 A0A1B0GVM2 712 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 SYT5O00445 386 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 BUB3O43684 328 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 UMODP07911 640 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 MMP3P08254 477 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 F7P08709 466 aaPredicted RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 CKMT1AP12532 417 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 SKIV2L2P42285 1042 aaKnown RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 CYP4A11Q02928 519 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 ILF3Q12906 894 aaKnown RBP eCLIP4.44□□□□□ -1.71e-8■■■□□ 18.6
RPS3A-211ENST00000512797 EIF4A2Q14240 407 aaKnown RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 PUM3Q15397 648 aaKnown RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 OTUD3Q5T2D3 398 aaPredicted RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 SYT13Q7L8C5 426 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 RFLNBQ8N5W9 214 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 ATOH1Q92858 354 aaPredicted RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 TXNDC15Q96J42 360 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 WDR12Q9GZL7 423 aaKnown RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 PLEKHA2Q9HB19 425 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 SDF2L1Q9HCN8 221 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 SLC45A1Q9Y2W3 748 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 UBR2Q8IWV8 1755 aa4.44□□□□□ -1.7
RPS3A-211ENST00000512797 MYH14Q7Z406 1995 aaKnown RBP4.44□□□□□ -1.7
RPS3A-211ENST00000512797 PAPPAQ13219 1627 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 CPDO75976 1380 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 NSD2O96028 1365 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 INSRP06213 1382 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 JCADQ9P266 1359 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 WDR81Q562E7 1941 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 PRC1O43663 620 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 CCNT1O60563 726 aaKnown RBP4.43□□□□□ -1.7
RPS3A-211ENST00000512797 SKAP2O75563 359 aaPredicted RBP4.43□□□□□ -1.7
RPS3A-211ENST00000512797 CBX6O95503 412 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 MVDP53602 400 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 MYBPHQ13203 477 aa4.43□□□□□ -1.7
RPS3A-211ENST00000512797 ZRSR1Q15695 479 aaKnown RBP4.43□□□□□ -1.7
RPS3A-211ENST00000512797 TYW3Q6IPR3 259 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms