RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MEI4A8MW99 385 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 PSMD12O00232 456 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SOCS7O14512 581 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 PRMT5O14744 637 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 ACRP10323 421 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 LBPP18428 481 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TSPAN8P19075 237 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SLC11A1P49279 550 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 CDH13P55290 713 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 RPS24P62847 133 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TRIM32Q13049 653 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 USP4Q13107 963 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 PPIGQ13427 754 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 KRT72Q14CN4 511 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 FBXL22Q6P050 247 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 ADAMTSL2Q86TH1 951 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TRAPPC5Q8IUR0 188 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 MIER2Q8N344 545 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TMEM174Q8WUU8 243 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TSC22D3Q99576 134 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TTC36A6NLP5 189 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 VPS4BO75351 444 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 CHRNA1P02708 482 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 C8AP07357 584 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 ME2P23368 584 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SULT2A1Q06520 285 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 POM121L1PQ3SYA9 428 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 CAPRIN2Q6IMN6 1127 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 DNAJB7Q7Z6W7 309 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 FAM126BQ8IXS8 530 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 NAT16Q8N8M0 369 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 MED8Q96G25 268 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SERAC1Q96JX3 654 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SMOC2Q9H3U7 446 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 STN1Q9H668 368 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 ZFYVE1Q9HBF4 777 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 EVLQ9UI08 416 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SNX13Q9Y5W8 968 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 NRAPQ86VF7 1730 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 ABCA3Q99758 1704 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 MEIS3P2A8K0S8 358 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 PDZK1P1A8MUH7 402 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 NEDD8-MDP1E9PL57 170 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SEC22BO75396 215 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 EDN1P05305 212 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 MAD2L1Q13257 205 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TCHHL1Q5QJ38 904 aaPredicted RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 TRIM48Q8IWZ4 208 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SPATA17Q96L03 361 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 SCML2Q9UQR0 700 aa13.17□□□□□ -0.3
PCDHA4-202ENST00000512229 PTGESO14684 152 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 CCL16O15467 120 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PDE5AO76074 875 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 CYBAP13498 195 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 CDH2P19022 906 aaPredicted RBP13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 EPHA3P29320 983 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PRIM2P49643 509 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 CHRNB3Q05901 458 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 IL27RAQ6UWB1 636 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 FAM151BQ6UXP7 276 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 RBFAQ8N0V3 343 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 MYO19Q96H55 970 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 SYT11Q9BT88 431 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 TLE6Q9H808 572 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PNPOQ9NVS9 261 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 MAST2Q6P0Q8 1798 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 INSIG1O15503 277 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PLIN3O60664 434 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PKMP14618 531 aaKnown RBP13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 CHRNA4P43681 627 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 KCNJ2P63252 427 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 MPP1Q00013 466 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 TSTD2Q5T7W7 516 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 HECTD2Q5U5R9 776 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 LDB1Q86U70 411 aaPredicted RBP13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 KREMEN2Q8NCW0 462 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 PPP1R16AQ96I34 528 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 OLFM3Q96PB7 478 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 TMEM175Q9BSA9 504 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 RAD18Q9NS91 495 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 MIOSQ9NXC5 875 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 STX18Q9P2W9 335 aaKnown RBP13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 ABHD14A-ACY1A0A1B0GW23 586 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 MYO1GB0I1T2 1018 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 CCL22O00626 93 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 ENPP3O14638 875 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 FGF19O95750 216 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 MLYCDO95822 493 aa13.16□□□□□ -0.3
PCDHA4-202ENST00000512229 SERPINA6P08185 405 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms