RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 FAM129CQ86XR2 697 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 FAM186BQ8IYM0 893 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 TTC13Q8NBP0 860 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 GOLGA5Q8TBA6 731 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 OR1E3Q8WZA6 343 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 C19orf60Q96EN9 201 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 C5orf34Q96MH7 638 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 HEPHQ9BQS7 1158 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 ASPSCR1Q9BZE9 553 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 MUC3BQ9H195 1237 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 APMAPQ9HDC9 416 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 KLQ9UEF7 1012 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 VANGL2Q9ULK5 521 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 SLC5A6Q9Y289 635 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 OAS3Q9Y6K5 1087 aaKnown RBP9.22□□□□□ -0.93
NUP54-211ENST00000512151 NEMP1O14524 444 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 KRT86O43790 486 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 RHOBTB3O94955 611 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 DLGAP3O95886 979 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 TRUB2O95900 331 aaKnown RBP9.21□□□□□ -0.94
NUP54-211ENST00000512151 THRAP10827 490 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 VDRP11473 427 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 HOXB4P17483 251 aaPredicted RBP9.21□□□□□ -0.94
NUP54-211ENST00000512151 CSTF2P33240 577 aaKnown RBP eCLIP9.21□□□□□ -0.94
NUP54-211ENST00000512151 STAT5AP42229 794 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 COPB1P53618 953 aaKnown RBP9.21□□□□□ -0.94
NUP54-211ENST00000512151 TRA2AQ13595 282 aaKnown RBP eCLIP9.21□□□□□ -0.94
NUP54-211ENST00000512151 NFATC4Q14934 902 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 NR1D2Q14995 579 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 NR6A1Q15406 480 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 TESK1Q15569 626 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 WSCD2Q2TBF2 565 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 ALFQ53S48 1182 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 CCDC183Q5T5S1 534 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 KDELC2Q7Z4H8 507 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 TTC39CQ8N584 583 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 UBR7Q8N806 425 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 ATP6V0D2Q8N8Y2 350 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 KIAA0895Q8NCT3 520 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 CCDC112Q8NEF3 446 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 OR6K2Q8NGY2 324 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 SMARCE1Q969G3 411 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 FAM149B1Q96BN6 582 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 RANBP9Q96S59 729 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 EFHD1Q9BUP0 239 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 INTS2Q9H0H0 1204 aaKnown RBP9.21□□□□□ -0.94
NUP54-211ENST00000512151 TMEM168Q9H0V1 697 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 ZDHHC6Q9H6R6 413 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 TMEM8AQ9HCN3 771 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 MRPL40Q9NQ50 206 aaKnown RBP9.21□□□□□ -0.94
NUP54-211ENST00000512151 RCOR3Q9P2K3 495 aaPredicted RBP9.21□□□□□ -0.94
NUP54-211ENST00000512151 POLHQ9Y253 713 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 COQ6Q9Y2Z9 468 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 OR1A2Q9Y585 309 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 PCSK5Q92824 1860 aa9.21□□□□□ -0.94
NUP54-211ENST00000512151 ANKRD36A6QL64 1941 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 CDC14CA4D256 554 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 BIN1O00499 593 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 TOR1BO14657 336 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 ZMPSTE24O75844 475 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 STK17BO94768 372 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 FBXO21O94952 628 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 CBX6O95503 412 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 PEX5P50542 639 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 DNA2P51530 1060 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 KRT83P78385 493 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 CARD16Q5EG05 197 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 ARTNQ5T4W7 220 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 SP5Q6BEB4 398 aaPredicted RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 C17orf82Q86X59 251 aaPredicted RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 SMYD4Q8IYR2 804 aaPredicted RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 DCAF4L2Q8NA75 395 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 OR7D4Q8NG98 312 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 OR4D9Q8NGE8 314 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 LURAP1Q96LR2 239 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 GSDMAQ96QA5 445 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 PPP1R9BQ96SB3 815 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 WRAP53Q9BUR4 548 aaKnown RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 APOOQ9BUR5 198 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 DPEP2Q9H4A9 486 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 FGF22Q9HCT0 170 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 SPATS2LQ9NUQ6 558 aaKnown RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 RRN3Q9NYV6 651 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 FCF1Q9Y324 198 aaKnown RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 TMEM184BQ9Y519 407 aaPredicted RBP9.2□□□□□ -0.94
NUP54-211ENST00000512151 SNX10Q9Y5X0 201 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 HS3ST4Q9Y661 456 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 RPS6KL1Q9Y6S9 549 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 DGKBQ9Y6T7 804 aa9.2□□□□□ -0.94
NUP54-211ENST00000512151 SYNJ2BP-COX16A0A087WUM0 186 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 TMEM202A6NGA9 273 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 TMEM110-MUSTN1A8MSY1 372 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 RHPN2P1A8MT19 583 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 M0QYV0 167 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 CLDN11O75508 207 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 TM7SF2O76062 418 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 SMC2O95347 1197 aa9.19□□□□□ -0.94
NUP54-211ENST00000512151 CD160O95971 181 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms