RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 SERPINA1P01009 418 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 PRLRP16471 622 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 TARSP26639 723 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 CYP2C18P33260 490 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 VHLP40337 213 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IDH2P48735 452 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 TTPAP49638 278 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ZC3H12AQ5D1E8 599 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 TAPT1Q6NXT6 567 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 APTXQ7Z2E3 356 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 DHFR2Q86XF0 187 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 TMC8Q8IU68 726 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 SCUBE1Q8IWY4 988 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 REXO1L1PQ8IX06 675 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 PJA1Q8NG27 643 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 STAG3L4Q8TBR4 150 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 HNRNPLLQ8WVV9 542 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 RIT1Q92963 219 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 HAVCR1Q96D42 359 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 VPS35Q96QK1 796 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CPNE1Q99829 537 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 SEMA4BQ9NPR2 832 aaPredicted RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 CRTAC1Q9NQ79 661 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IL17RBQ9NRM6 502 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 PIH1D1Q9NWS0 290 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 ACTL7BQ9Y614 415 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IRAK3Q9Y616 596 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 NT5C1B-RDH14C9J2C7 533 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 SLC37A4O43826 429 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 RSL1D1O76021 490 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 RGS20O76081 388 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 RECQL5O94762 991 aaPredicted RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 HMGCRP04035 888 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CCNA2P20248 432 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CCND1P24385 295 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 MYL9P24844 172 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 HSD17B3P37058 310 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CD86P42081 329 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IL12RB1P42701 662 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 NEK3P51956 506 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 DGKEP52429 567 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ARFIP1P53367 373 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 SEC13P55735 322 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 GRB10Q13322 594 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 OASLQ15646 514 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 TIMM50Q3ZCQ8 353 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 SPANXN2Q5MJ10 180 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 C9orf64Q5T6V5 341 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IRGCQ6NXR0 463 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 C3orf67Q6ZVT6 689 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CXXC5Q7LFL8 322 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 JAZF1Q86VZ6 243 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 C17orf64Q86WR6 236 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IFNL1Q8IU54 200 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 GALNT13Q8IUC8 556 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 REM2Q8IYK8 340 aaPredicted RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 CDYL2Q8N8U2 506 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 TPCN2Q8NHX9 752 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 POMKQ9H5K3 350 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 RNF121Q9H920 327 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 PLEKHA1Q9HB21 404 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.81□□□□□ -1.48
USP38-203ENST00000511739 MTRRQ9UBK8 725 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 TMCO1Q9UM00 188 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ERVW-1Q9UQF0 538 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 DMTF1Q9Y222 760 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 A0A087X1B8 175 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 FAM25EA8MYX2 175 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 HACD1B0YJ81 288 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 PEX12O00623 359 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 OR5F1O95221 314 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 IFNA6P05013 189 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CYP17A1P05093 508 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 NT5EP21589 574 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 PON1P27169 355 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CD52P31358 61 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 OR1D2P34982 312 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CTSOP43234 321 aaPredicted RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 SLC6A3Q01959 620 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 GRM3Q14832 879 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 PLA2G4EQ3MJ16 856 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 GALNT18Q6P9A2 607 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 AFTPHQ6ULP2 937 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 RAD9BQ6WBX8 426 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 KYQ8NBH2 561 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ACTL9Q8TC94 416 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 SETD7Q8WTS6 366 aaKnown RBP5.81□□□□□ -1.48
USP38-203ENST00000511739 APBB2Q92870 758 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 MKL1Q969V6 931 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 GAL3ST3Q96A11 431 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 SHDQ96IW2 340 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 WDR24Q96S15 920 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ZNF607Q96SK3 696 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 TMEM79Q9BSE2 394 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ZYG11BQ9C0D3 744 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ISCUQ9H1K1 167 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CKLFQ9UBR5 152 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 COG5Q9UP83 839 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 CORO2BQ9UQ03 480 aa5.81□□□□□ -1.48
USP38-203ENST00000511739 ROBO3Q96MS0 1386 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms