RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 NLRP8Q86W28 1048 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 NDUFAF2Q8N183 169 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 CNTD1Q8N815 330 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 NETO2Q8NC67 525 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 TCEAL3Q969E4 200 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 CENPTQ96BT3 561 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 NSMCE3Q96MG7 304 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 KLF6Q99612 283 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-221ENST00000510541 FRMD8P1Q9BZ68 369 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-221ENST00000510541 MIR1-1HGQ9H1L0 117 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 PCDH12Q9NPG4 1184 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 RXFP3Q9NSD7 469 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 TRIM10Q9UDY6 481 aa17.39■□□□□ 0.37
CLDND1-221ENST00000510541 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.37
CLDND1-221ENST00000510541 PLXNA2O75051 1894 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 GDF9O60383 454 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 TM7SF2O76062 418 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 EPOP01588 193 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 PYGMP11217 842 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 CSNK1EP49674 416 aaKnown RBP17.38■□□□□ 0.37
CLDND1-221ENST00000510541 ATXN3P54252 364 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-221ENST00000510541 YPEL5P62699 121 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 ADCY2Q08462 1091 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 SGCGQ13326 291 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 FGL2Q14314 439 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 CCDC6Q16204 474 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 RSPO4Q2I0M5 234 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-221ENST00000510541 ARMC12Q5T9G4 340 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 DPPA4Q7L190 304 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 ERMP1Q7Z2K6 904 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 PIH1D2Q8WWB5 315 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 SNX19Q92543 992 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 IMP4Q96G21 291 aaKnown RBP17.38■□□□□ 0.37
CLDND1-221ENST00000510541 TEKT5Q96M29 485 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 QKIQ96PU8 341 aaKnown RBP eCLIP17.38■□□□□ 0.373e-7■■□□□ 11.5
CLDND1-221ENST00000510541 ALS2CR12Q96Q35 445 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 SRPK1Q96SB4 655 aaKnown RBP17.38■□□□□ 0.37
CLDND1-221ENST00000510541 SEMA3CQ99985 751 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 FERMT1Q9BQL6 677 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 SLC25A51Q9H1U9 297 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 CARD9Q9H257 536 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 SMOC1Q9H4F8 434 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 NT5MQ9NPB1 228 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 TRHDEQ9UKU6 1024 aa17.38■□□□□ 0.37
CLDND1-221ENST00000510541 ASCC3Q8N3C0 2202 aaKnown RBP17.37■□□□□ 0.37
CLDND1-221ENST00000510541 NEMP1O14524 444 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 OPHN1O60890 802 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 HLA-DQB2P05538 268 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 HOXC4P09017 264 aaPredicted RBP17.37■□□□□ 0.37
CLDND1-221ENST00000510541 ZNF30P17039 623 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 XPAP23025 273 aaPredicted RBP17.37■□□□□ 0.37
CLDND1-221ENST00000510541 TEAD1P28347 426 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 RABIFP47224 123 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 ID4P47928 161 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 NXPH1P58417 271 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 MEI1Q5TIA1 1274 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 PIP4P1Q86T03 277 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 ZSWIM9Q86XI8 627 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 CCDC50Q8IVM0 306 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 MINDY1Q8N5J2 469 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 CXorf40AQ8TE69 158 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 HAUS1Q96CS2 278 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 RMDN1Q96DB5 314 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 TBATAQ96M53 351 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 SLC6A18Q96N87 628 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 PPP1R2P1Q96PQ5 205 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 TDRD1Q9BXT4 1180 aaKnown RBP17.37■□□□□ 0.37
CLDND1-221ENST00000510541 GUCA1BQ9UMX6 200 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 PPP2R2CQ9Y2T4 447 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 SLCO1B1Q9Y6L6 691 aa17.37■□□□□ 0.37
CLDND1-221ENST00000510541 A0A0U1RQJ8 604 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 GOLGA6L9A6NEM1 432 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 IGLON5A6NGN9 336 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 A6NNZ2 444 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 NEBLO76041 1014 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 JCHAINP01591 159 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 WNT1P04628 370 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 MMP2P08253 660 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 CYP2A6P11509 494 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-221ENST00000510541 TNNT1P13805 278 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 PECAM1P16284 738 aaPredicted RBP17.36■□□□□ 0.37
CLDND1-221ENST00000510541 C21orf59P57076 290 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 PFN3P60673 137 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 AP1B1Q10567 949 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 TRAF2Q12933 501 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 RALGDSQ12967 914 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 KIF19Q2TAC6 998 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 HLA-BQ31612 363 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 SEL1L3Q68CR1 1132 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 NPNTQ6UXI9 565 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 LIPIQ6XZB0 460 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 GDF3Q9NR23 364 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 PCDHGC4Q9Y5F7 938 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 RAI2Q9Y5P3 530 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 DOCK9Q9BZ29 2069 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 PCNX2A6NKB5 2137 aa17.36■□□□□ 0.37
CLDND1-221ENST00000510541 CNOT1A5YKK6 2376 aaKnown RBP17.35■□□□□ 0.37
CLDND1-221ENST00000510541 A0A1B0GTQ1 180 aa17.35■□□□□ 0.37
CLDND1-221ENST00000510541 A0A1B0GVT2 93 aa17.35■□□□□ 0.37
CLDND1-221ENST00000510541 C4orf47A7E2U8 309 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms