RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 UNC5CO95185 931 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 PLGP00747 810 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 PDGFBP01127 241 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 PENKP01210 267 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ERBB2P04626 1255 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 GNAI2P04899 355 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 RB1P06400 928 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ZFYP08048 801 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 MMP2P08253 660 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CYC1P08574 325 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 POLR2MP0CAP2 368 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ACTN1P12814 892 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ETS1P14921 441 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CSF2RAP15509 400 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 GABRB1P18505 474 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CDH2P19022 906 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 PRKCHP24723 683 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 DDX6P26196 483 aaKnown RBP eCLIP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 MC5RP33032 325 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SREBF1P36956 1147 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 GCLCP48506 637 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 BMXP51813 675 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 STAT2P52630 851 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CAPZA1P52907 286 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 METAP1P53582 386 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ELLP55199 621 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 UFM1P61960 85 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ACY1Q03154 408 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 TBL3Q12788 808 aaKnown RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 RESTQ13127 1097 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ATP1A4Q13733 1029 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 BAATQ14032 418 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 BOP1Q14137 746 aaKnown RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 FRG1Q14331 258 aaKnown RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 NEDD9Q14511 834 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ZNF273Q14593 569 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CCDC57Q2TAC2 916 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 TWISTNBQ3B726 338 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SPDYCQ5MJ68 293 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ABHD17BQ5VST6 288 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 GKAP1Q5VSY0 366 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 AADACL4Q5VUY2 407 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 KIAA0930Q6ICG6 404 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ETFRF1Q6IPR1 90 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CLEC2AQ6UVW9 174 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 MFSD7Q6UXD7 560 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 LRIG3Q6UXM1 1119 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ABHD15Q6UXT9 468 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SYNE3Q6ZMZ3 975 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CLEC17AQ6ZS10 378 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SPATA19Q7Z5L4 167 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ELMOD2Q8IZ81 293 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 PI4KAP1Q8N8J0 262 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 BOLLQ8N9W6 283 aaKnown RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 XXYLT1Q8NBI6 393 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 TMEM116Q8NCL8 245 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 OR52M1Q8NGK5 317 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ST7LQ8TDW4 575 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 C17orf50Q8WW18 174 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 HMGB4Q8WW32 186 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 RAPGEF4Q8WZA2 1011 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 MCRS1Q96EZ8 462 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SAT2Q96F10 170 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CNOT6LQ96LI5 555 aaKnown RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 LINC00615Q96LM1 132 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CFAP57Q96MR6 1250 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 GAL3ST4Q96RP7 486 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 INTS14Q96SY0 518 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 UHRF1Q96T88 793 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 MGME1Q9BQP7 344 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SRSF8Q9BRL6 282 aaKnown RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 EDEM2Q9BV94 578 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SPATA5L1Q9BVQ7 753 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 CCDC106Q9BWC9 280 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 PUS3Q9BZE2 481 aaKnown RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 MS4A7Q9GZW8 240 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 TTC12Q9H892 705 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SLAMF7Q9NQ25 335 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 HPS4Q9NQG7 708 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 WSB2Q9NYS7 404 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 SPASTQ9UBP0 616 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ARMCX3Q9UH62 379 aaPredicted RBP4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 ZDHHC8Q9ULC8 765 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 RIMKLBQ9ULI2 386 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 NENFQ9UMX5 172 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 AGAP1Q9UPQ3 857 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 NAALAD2Q9Y3Q0 740 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 TEX264Q9Y6I9 313 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 RPTORQ8N122 1335 aa4.4□□□□□ -1.71
SMARCA5-202ENST00000508573 A0A1W2PR48 441 aa4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 XKRY2A2RUG3 117 aa4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 GAGE10A6NGK3 116 aa4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 SH2D7A6NKC9 451 aaPredicted RBP4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 HNRNPCL2B2RXH8 293 aa4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 GCOM1H8Y6P7 765 aaPredicted RBP4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 CXCL11O14625 94 aa4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 PPEF2O14830 753 aa4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 ANGPT2O15123 496 aa4.39□□□□□ -1.71
SMARCA5-202ENST00000508573 LDLRAD4O15165 306 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms