RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZNF781Q8N8C0 355 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 GPATCH11Q8N954 259 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 AGAP11Q8TF27 550 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 RILPQ96NA2 401 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 CINPQ9BW66 212 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-208ENST00000507823 IL21Q9HBE4 155 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 CD248Q9HCU0 757 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.75■□□□□ 0.43
SFXN1-208ENST00000507823 XPR1Q9UBH6 696 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 ATP11BQ9Y2G3 1177 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 INSL5Q9Y5Q6 135 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 RPP40O75818 363 aaKnown RBP17.75■□□□□ 0.43
SFXN1-208ENST00000507823 SAT1P21673 171 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 SERPINB5P36952 375 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 RGRP47804 291 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 PGGT1BP53609 377 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 ASPHQ12797 758 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 SPOUT1Q5T280 376 aaKnown RBP17.75■□□□□ 0.43
SFXN1-208ENST00000507823 Q6ZNB5 142 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 C1orf21Q9H246 121 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 MARCH4Q9P2E8 410 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-208ENST00000507823 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.75■□□□□ 0.43
SFXN1-208ENST00000507823 KCTD3Q9Y597 815 aa17.75■□□□□ 0.43
SFXN1-208ENST00000507823 INSIG1O15503 277 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 GRIA4P48058 902 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 WDR5P61964 334 aaKnown RBP17.74■□□□□ 0.43
SFXN1-208ENST00000507823 PRAMEP78395 509 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 TECRLQ5HYJ1 363 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 SWT1Q5T5J6 900 aaKnown RBP17.74■□□□□ 0.43
SFXN1-208ENST00000507823 HECTD2Q5U5R9 776 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 METTL21CQ5VZV1 264 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 TMPRSS6Q8IU80 811 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 ADAMTS19Q8TE59 1207 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 HEXDCQ8WVB3 486 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 NUDCD1Q96RS6 583 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 ILKAPQ9H0C8 392 aaPredicted RBP17.74■□□□□ 0.43
SFXN1-208ENST00000507823 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 ACTL7AQ9Y615 435 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 DENND4CQ5VZ89 1909 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 MATN2O00339 956 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 GYG2O15488 501 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 NPHS1O60500 1241 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 ZMPSTE24O75844 475 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 CD160O95971 181 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 PRLP01236 227 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 OGNP20774 298 aaKnown RBP17.74■□□□□ 0.43
SFXN1-208ENST00000507823 GLDCP23378 1020 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 SUOXP51687 545 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF140P52738 457 aaPredicted RBP17.74■□□□□ 0.43
SFXN1-208ENST00000507823 EPHB3P54753 998 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 SLC12A2P55011 1212 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 LSMEM2Q8N112 164 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 TEX9Q8N6V9 391 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 SCYL1Q96KG9 808 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 VWA7Q9Y334 891 aa17.74■□□□□ 0.43
SFXN1-208ENST00000507823 PRR5-ARHGAP8B1AHC4 643 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 TIMP1P01033 207 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 MNAT1P51948 309 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 ALDH18A1P54886 795 aaKnown RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 ARHGAP8P85298 464 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 PFKPQ01813 784 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 CREMQ03060 361 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 PRKAA1Q13131 559 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 TAF12Q16514 161 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 TYSND1Q2T9J0 566 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 WLSQ5T9L3 541 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 PTAR1Q7Z6K3 402 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 CFAP61Q8NHU2 1237 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF333Q96JL9 665 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 DNAJC1Q96KC8 554 aaKnown RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 TBATAQ96M53 351 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 SPON2Q9BUD6 331 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 TDRD1Q9BXT4 1180 aaKnown RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 COG4Q9H9E3 785 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF334Q9HCZ1 680 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 PTPRSQ13332 1948 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 PRRG1O14668 218 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 MAGEC1O60732 1142 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 PPM1AP35813 382 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 GLRBP48167 497 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 ARF5P84085 180 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 GALNT3Q14435 633 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 FAM83EQ2M2I3 478 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 AGAP9Q5VTM2 703 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 FAM45BPQ6NSW5 357 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 TDRD5Q8NAT2 981 aaKnown RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 OR6P1Q8NGX9 317 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 TTC8Q8TAM2 541 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 FAM45AQ8TCE6 357 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 POPDC3Q9HBV1 291 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 NLE1Q9NVX2 485 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 DNMT3BQ9UBC3 853 aaKnown RBP17.73■□□□□ 0.43
SFXN1-208ENST00000507823 ASB3Q9Y575 518 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 OR51B4Q9Y5P0 310 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 ARL5AQ9Y689 179 aa17.73■□□□□ 0.43
SFXN1-208ENST00000507823 BPTFQ12830 3046 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 SLCO1B7G3V0H7 640 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 GOT2P00505 430 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 LTA4HP09960 611 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 ATP5F1P24539 256 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms