RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 TAF12Q16514 161 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 HIST2H2ACQ16777 129 aaPredicted RBP3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 KRT24Q2M2I5 525 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 SOWAHAQ2M3V2 549 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 ESCO2Q56NI9 601 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 INO80CQ6PI98 192 aaPredicted RBP3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 H1FNTQ75WM6 255 aaPredicted RBP3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 ARMC9Q7Z3E5 817 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 TADA2BQ86TJ2 420 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 FJX1Q86VR8 437 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 SMAP1Q8IYB5 467 aaPredicted RBP3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 CCDC105Q8IYK2 499 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 CPXCR1Q8N123 301 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 MIGA1Q8NAN2 632 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 ZNF114Q8NC26 417 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 PPM1EQ8WY54 764 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 MAELQ96JY0 434 aaKnown RBP3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 GAREM1Q9H706 876 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 BRF2Q9HAW0 419 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 CYSLTR2Q9NS75 346 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 OR6C3Q9NZP0 311 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 MPP6Q9NZW5 540 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 KCNG2Q9UJ96 466 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 NFS1Q9Y697 457 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 PLSCR5A0PG75 271 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 MAGEA13PA6NCF6 341 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 HSPB2A8KAH6 182 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 SMTNL1A8MU46 457 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 TIMM23O14925 209 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 TPD52L2O43399 206 aaKnown RBP3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 GAS8-AS1O95177 125 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 MT-CYBP00156 380 aaPredicted RBP3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 URODP06132 367 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 IRF1P10914 325 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 RPL3P39023 403 aaKnown RBP3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 BIRC3Q13489 604 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 CAPSQ13938 189 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 SLC39A14Q15043 492 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 TAF11Q15544 211 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 HSPB2Q16082 182 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 WBP2NLQ6ICG8 309 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 TMEM81Q6P7N7 255 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 PRSS57Q6UWY2 283 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 LINGO2Q7L985 606 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 ZNF354CQ86Y25 554 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 TSPYL6Q8N831 410 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 SCCPDHQ8NBX0 429 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 GJC3Q8NFK1 279 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 MYRIPQ8NFW9 859 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 RUFY2Q8WXA3 655 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 STAMQ92783 540 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 WBP2Q969T9 261 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 FBXL8Q96CD0 374 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 BICD1Q96G01 975 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 TXNDC15Q96J42 360 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 TBATAQ96M53 351 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 SLITRK1Q96PX8 696 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 PCDH9Q9HC56 1237 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 IL1RAPL1Q9NZN1 696 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 PEMTQ9UBM1 199 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 HSF4Q9ULV5 492 aa3.15□□□□□ -1.91
AC008539.1-201ENST00000507653 LOC102724159A0A0B4J2E5 919 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 TYW5A2RUC4 315 aaKnown RBP3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 GOLGA6L9A6NEM1 432 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 HSPA12AO43301 675 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 GRID2O43424 1007 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 SLC25A17O43808 307 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 SOCS5O75159 536 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 MMP2P08253 660 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 SNRNP70P08621 437 aaKnown RBP3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 TFPIP10646 304 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 COX7A2P14406 83 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 HNRNPH1P31943 449 aaKnown RBP3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 CDH15P55291 814 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 CLDN2P57739 230 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 ERVFC1-1P60608 527 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 PTP4A2Q12974 167 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 PWP2Q15269 919 aaKnown RBP3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 ZRSR1Q15695 479 aaKnown RBP3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 KRT71Q3SY84 523 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 ZNF667Q5HYK9 610 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 RRM2BQ7LG56 351 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 SHFQ7M4L6 423 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 ZNF329Q86UD4 541 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 RFLNBQ8N5W9 214 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 PLD5Q8N7P1 536 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 AGBL3Q8NEM8 1001 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 BEST2Q8NFU1 509 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 LMO3Q8TAP4 145 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 WFIKKN2Q8TEU8 576 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 HTRA1Q92743 480 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 INPP4AQ96PE3 977 aaPredicted RBP3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 EPYCQ99645 322 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 SH3GL2Q99962 352 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 MXRA8Q9BRK3 442 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 H2AFJQ9BTM1 129 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 C1QTNF4Q9BXJ3 329 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 PLEKHA4Q9H4M7 779 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 RETREG1Q9H6L5 497 aa3.14□□□□□ -1.91
AC008539.1-201ENST00000507653 EBF2Q9HAK2 575 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms