RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 K7ERQ8 282 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 AGPSO00116 658 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CBX4O00257 560 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 YKT6O15498 198 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 TEX33O43247 280 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 SMAD6O43541 496 aaKnown RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 AHCYL1O43865 530 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 MGRN1O60291 552 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 BUB1BO60566 1050 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 SNAP91O60641 907 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 MAGEC1O60732 1142 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ZNF821O75541 412 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 NDUFA10O95299 355 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 PLEKP08567 350 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 GZMAP12544 262 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 TNFAIP3P21580 790 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 GPD1P21695 349 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CASP14P31944 242 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 L1CAMP32004 1257 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 PAFAH1B1P43034 410 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 GRK6P43250 576 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 RECQLP46063 649 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 RXRGP48443 463 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ZNF143P52747 638 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 HDAC4P56524 1084 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 C21orf59P57076 290 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ST3GAL2Q16842 350 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 C15orf59Q2T9L4 293 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CMPK2Q5EBM0 449 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 NAPEPLDQ6IQ20 393 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 TLDC1Q6P9B6 456 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CYB5D1Q6P9G0 228 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 RAD9BQ6WBX8 426 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 MON1BQ7L1V2 547 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 TFAP2DQ7Z6R9 452 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ADAT2Q7Z6V5 191 aaKnown RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 SLFN11Q7Z7L1 901 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 NLRP14Q86W24 1093 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 PCDH20Q8N6Y1 951 aaKnown RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ANKS4BQ8N8V4 417 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 NOA1Q8NC60 698 aaKnown RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 BAHD1Q8TBE0 780 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 RHBDD1Q8TEB9 315 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ZNF473Q8WTR7 871 aaKnown RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 FAM172AQ8WUF8 416 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CENPTQ96BT3 561 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 LRIG1Q96JA1 1093 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 SERAC1Q96JX3 654 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CAMK1GQ96NX5 476 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ALS2CR12Q96Q35 445 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ELF4Q99607 663 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 DNAJC7Q99615 494 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CNPY3Q9BT09 278 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 HDAC8Q9BY41 377 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 PREBQ9HCU5 417 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 ATP13A1Q9HD20 1204 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 SLC40A1Q9NP59 571 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 TMEM248Q9NWD8 314 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CTNNAL1Q9UBT7 734 aa8.15□□□□□ -1.1
SCN1A-207ENST00000507401 CORO1CQ9ULV4 474 aaPredicted RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 APOBEC2Q9Y235 224 aaKnown RBP8.15□□□□□ -1.1
SCN1A-207ENST00000507401 NYNRINQ9P2P1 1898 aaKnown RBP8.15□□□□□ -1.11
SCN1A-207ENST00000507401 CHD5Q8TDI0 1954 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 GRID2IPA4D2P6 1211 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 ZSCAN5CA6NGD5 496 aaPredicted RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 SOWAHDA6NJG2 315 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 PRAMEF26H0Y7S4 382 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 H0Y8X5 98 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 TLR4O00206 839 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CES2O00748 559 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 KDELR3O43731 214 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 LRIG2O94898 1065 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 DKK1O94907 266 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 SNUPNO95149 360 aaKnown RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 WNT1P04628 370 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 FESP07332 822 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CTSLP07711 333 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CDK4P11802 303 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 DESP17661 470 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 NR1D1P20393 614 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 RRM1P23921 792 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 HTR7P34969 479 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 MDH1P40925 334 aaKnown RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 ARRB1P49407 418 aaPredicted RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 SERPINH1P50454 418 aaKnown RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CCT8P50990 548 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 YBEYP58557 167 aaPredicted RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 TAS2R38P59533 333 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 ARF5P84085 180 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 STAT4Q14765 748 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CDO1Q16878 200 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 INAVAQ3KP66 663 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 SETMARQ53H47 684 aaPredicted RBP8.14□□□□□ -1.11
SCN1A-207ENST00000507401 CARD16Q5EG05 197 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 FIGNQ5HY92 759 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 KCNT1Q5JUK3 1230 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 PIP5KL1Q5T9C9 394 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 AGBL4Q5VU57 503 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 DNAJC24Q6P3W2 148 aa8.14□□□□□ -1.11
SCN1A-207ENST00000507401 C22orf39Q6P5X5 142 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms