RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 BUB1BO60566 1050 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 TCEA3O75764 348 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 C1QL1O75973 258 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 RASGRP1O95267 797 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PCCBP05166 539 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 CTSEP14091 401 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 RBMS1P29558 406 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 MMP12P39900 470 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 LIG3P49916 1009 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PEX5P50542 639 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PAPOLAP51003 745 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 BLKP51451 505 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 HK3P52790 923 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 TMPRSS3P57727 454 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 C19orf57Q0VDD7 668 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 MAMLD1Q13495 774 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 ELOCQ15369 112 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 BROXQ5VW32 411 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PLEKHA7Q6IQ23 1121 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 ESRP1Q6NXG1 681 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PPP1R2P3Q6NXS1 205 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 FOXR1Q6PIV2 292 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 ENPP7Q6UWV6 458 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 RD3Q7Z3Z2 195 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 SRLQ86TD4 932 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 ARHGAP12Q8IWW6 846 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 FSTL5Q8N475 847 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 KYQ8NBH2 561 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 TPCN2Q8NHX9 752 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 ZNF641Q96N77 438 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 TUBGCP5Q96RT8 1024 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 KCTD15Q96SI1 283 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 CCDC3Q9BQI4 270 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 APOOQ9BUR5 198 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 CINPQ9BW66 212 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 SP110Q9HB58 689 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 CPNE5Q9HCH3 593 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PARVAQ9NVD7 372 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 DONSONQ9NYP3 566 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 GULP1Q9UBP9 304 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 KLQ9UEF7 1012 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PCSK1NQ9UHG2 260 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 PADI4Q9UM07 663 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 OR1A2Q9Y585 309 aa11.63□□□□□ -0.55
HMGCS1-204ENST00000507293 LRRC53A6NM62 1247 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 EIF3CLB5ME19 914 aaKnown RBP11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 KLK10O43240 276 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 TEX33O43247 280 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 DAPK3O43293 454 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 PALMO75781 387 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ALPIP09923 528 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ERCC2P18074 760 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 HTR1BP28222 390 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 SERPINA4P29622 427 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 CSNK1DP48730 415 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 PDX1P52945 283 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 UCNP55089 124 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 SRP54P61011 504 aaKnown RBP11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 RALGDSQ12967 914 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 MTM1Q13496 603 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 SPIDRQ14159 915 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 INPP5AQ14642 412 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ASIC2Q16515 512 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 CCDC183Q5T5S1 534 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ERMARDQ5T6L9 678 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 AFMIDQ63HM1 303 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 KCTD16Q68DU8 428 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 IGF2-ASQ6U949 168 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ARHGAP36Q6ZRI8 547 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 RFX8Q6ZV50 586 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ARFGAP1Q8N6T3 406 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 NPWQ8N729 165 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ARL10Q8N8L6 244 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 TSEN2Q8NCE0 465 aaKnown RBP11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ATL2Q8NHH9 583 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 WDR48Q8TAF3 677 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 CCDC74AQ96AQ1 378 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 PDXPQ96GD0 296 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 PRR11Q96HE9 360 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 WDR92Q96MX6 357 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 EIF3CQ99613 913 aaKnown RBP11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 ATP13A3Q9H7F0 1226 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
HMGCS1-204ENST00000507293 LOC400499M0QZD8 3231 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 CCDC187A0A096LP49 1063 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 TMEM191CA6NGB0 347 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 GOLGA6L22H0YM25 854 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 DFFAO00273 331 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 PRPSAP2O60256 369 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 RNF8O76064 485 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 MIPP30301 263 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 TYRO3Q06418 890 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 AGERQ15109 404 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 PPP6R3Q5H9R7 873 aaPredicted RBP11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 ARHGAP40Q5TG30 622 aa11.61□□□□□ -0.55
HMGCS1-204ENST00000507293 LVRNQ6Q4G3 990 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms