RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LRRC8BQ6P9F7 803 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 PPP1R21Q6ZMI0 780 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 LINC00523Q86TU6 105 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 TMPRSS6Q8IU80 811 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 GSPT2Q8IYD1 628 aaKnown RBP14.28□□□□□ -0.12
RNF4-208ENST00000507247 GPR161Q8N6U8 529 aaKnown RBP14.28□□□□□ -0.12
RNF4-208ENST00000507247 SPOCK2Q92563 424 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 RUBCNQ92622 972 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 ARNT2Q9HBZ2 717 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 DKK3Q9UBP4 350 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 NFU1Q9UMS0 254 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 SCN8AQ9UQD0 1980 aa14.28□□□□□ -0.12
RNF4-208ENST00000507247 C16orf96A6NNT2 1141 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 ANKRD66B4E2M5 251 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 NDC80O14777 642 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 CTIFO43310 598 aaKnown RBP14.27□□□□□ -0.13
RNF4-208ENST00000507247 RNASEH1O60930 286 aaKnown RBP14.27□□□□□ -0.13
RNF4-208ENST00000507247 ATG13O75143 517 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 BANF1O75531 89 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 ADH1BP00325 375 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 FGF1P05230 155 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 C7P10643 843 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 TIMP2P16035 220 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 TPH1P17752 444 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 CTPS1P17812 591 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 AOC1P19801 751 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 DRD3P35462 400 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 MAGEA3P43357 314 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 CAV1Q03135 178 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 CDH17Q12864 832 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 MTAPQ13126 283 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 HLTFQ14527 1009 aaKnown RBP eCLIP14.27□□□□□ -0.13
RNF4-208ENST00000507247 MSS51Q4VC12 460 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 BRAT1Q6PJG6 821 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 AGGF1Q8N302 714 aaeCLIP14.27□□□□□ -0.13
RNF4-208ENST00000507247 SPEM1Q8N4L4 309 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 ZCCHC9Q8N567 271 aaKnown RBP14.27□□□□□ -0.13
RNF4-208ENST00000507247 AADATQ8N5Z0 425 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 HCAR2Q8TDS4 363 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 RMDN1Q96DB5 314 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 MRGPRX1Q96LB2 322 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 HHIPQ96QV1 700 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 PARD6BQ9BYG5 372 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 PHTF1Q9UMS5 762 aa14.27□□□□□ -0.13
RNF4-208ENST00000507247 A0A0J9YYE9 177 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 A0A0U1RQS6 177 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 UPK3BL1B0FP48 263 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 UPK3BL2E5RIL1 263 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 SPINT1O43278 529 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 TRBC1P01850 177 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 ALPIP09923 528 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 PIRTP0C851 137 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 MLNP12872 115 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 C5AR1P21730 350 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 ABL2P42684 1182 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 GRIA4P48058 902 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 DGKEP52429 567 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 EPHB1P54762 984 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 SESN2P58004 480 aaPredicted RBP14.26□□□□□ -0.13
RNF4-208ENST00000507247 RPL26P61254 145 aaKnown RBP14.26□□□□□ -0.13
RNF4-208ENST00000507247 SARNPP82979 210 aaKnown RBP14.26□□□□□ -0.13
RNF4-208ENST00000507247 SEMG2Q02383 582 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 CNTN1Q12860 1018 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 UGP2Q16851 508 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 CERCAMQ5T4B2 595 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 FAM46CQ5VWP2 391 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 WDR93Q6P2C0 686 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 MPP5Q8N3R9 675 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 PAF1Q8N7H5 531 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 DNAAF3Q8N9W5 541 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 HMGB4Q8WW32 186 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 SIPA1Q96FS4 1042 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 ADGRE3Q9BY15 652 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 FAM129AQ9BZQ8 928 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 PABPC3Q9H361 631 aaKnown RBP14.26□□□□□ -0.13
RNF4-208ENST00000507247 XAB2Q9HCS7 855 aaKnown RBP14.26□□□□□ -0.13
RNF4-208ENST00000507247 POLMQ9NP87 494 aaPredicted RBP14.26□□□□□ -0.13
RNF4-208ENST00000507247 CD93Q9NPY3 652 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 SERGEFQ9UGK8 458 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 RPL26L1Q9UNX3 145 aaKnown RBP14.26□□□□□ -0.13
RNF4-208ENST00000507247 PPIL1Q9Y3C6 166 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 SPO11Q9Y5K1 396 aa14.26□□□□□ -0.13
RNF4-208ENST00000507247 EML5Q05BV3 1969 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 A0A1W2PP55 124 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 A0A1W2PQ67 120 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 PPFIA2O75334 1257 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 ADRB3P13945 408 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 MGAT1P26572 445 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 P2RY2P41231 377 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 MAGEA9P43362 315 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 TNNT3P45378 269 aaPredicted RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 NEK3P51956 506 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 ARL4CP56559 192 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 CRADDP78560 199 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 DHX9Q08211 1270 aaKnown RBP14.25□□□□□ -0.13
RNF4-208ENST00000507247 HIF1AQ16665 826 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 PIP5KL1Q5T9C9 394 aa14.25□□□□□ -0.13
RNF4-208ENST00000507247 DENND2CQ68D51 928 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms