RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 MYO1FO00160 1098 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 CBFA2T2O43439 604 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 HTRA2O43464 458 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 CKMT1AP12532 417 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 C6P13671 934 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 SERPINB6P35237 376 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 HSPA9P38646 679 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 RENBPP51606 427 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 CLDN6P56747 220 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 AP1S1P61966 158 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 RALGDSQ12967 914 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 TRIM14Q14142 442 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 LBRQ14739 615 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 IRF4Q15306 451 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 NFKBIBQ15653 356 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 WSCD2Q2TBF2 565 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 CCDC157Q569K6 752 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 ZNF542PQ5EBM4 170 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 MACC1Q6ZN28 852 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 CPNE8Q86YQ8 564 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 LRRC49Q8IUZ0 686 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 VSTM4Q8IW00 320 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 PGBD5Q8N414 524 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 PDCD7Q8N8D1 485 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 OR8K1Q8NGG5 319 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 ZNF564Q8TBZ8 553 aaPredicted RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 MGME1Q9BQP7 344 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 WRAP53Q9BUR4 548 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 C1QTNF7Q9BXJ2 289 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 PACSIN1Q9BY11 444 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 CCDC86Q9H6F5 360 aaKnown RBP9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 UVRAGQ9P2Y5 699 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 COQ6Q9Y2Z9 468 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 LRP4O75096 1905 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 TRABD2BA6NFA1 517 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 H3BM21 787 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 FFAR2O15552 330 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 AQP9O43315 295 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 MFAP3LO75121 409 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 SOCS5O75159 536 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 NEBLO76041 1014 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 PROSCO94903 275 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 PRKCGP05129 697 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 CD48P09326 243 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 H2AFZP0C0S5 128 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 TMEM253P0C7T8 217 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ALPPL2P10696 532 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 JUNDP17535 347 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 GM2AP17900 193 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 XPAP23025 273 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 MAN1A1P33908 653 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 HNF1BP35680 557 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 LIG3P49916 1009 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 PEX5P50542 639 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 SCNN1BP51168 640 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 THOP1P52888 689 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 CDH6P55285 790 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 TAS2R40P59535 323 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 BCL2L1Q07817 233 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 MMRN1Q13201 1228 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 DPYSL3Q14195 570 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 PTK2BQ14289 1009 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 LRRC14Q15048 493 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 PAFAH1B3Q15102 231 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ATP13A4Q4VNC1 1196 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 RALGPS1Q5JS13 557 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 HES3Q5TGS1 186 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ERAP2Q6P179 960 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 LIPIQ6XZB0 460 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 H2AFVQ71UI9 128 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 DPPA4Q7L190 304 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 RBFAQ8N0V3 343 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ATPAF2Q8N5M1 289 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 TEX26Q8N6G2 289 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 MDM1Q8TC05 714 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 FAF2Q96CS3 445 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 APOLD1Q96LR9 279 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 NUDCD1Q96RS6 583 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ZNF670Q9BS34 389 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 DUSP23Q9BVJ7 150 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 TCEAL2Q9H3H9 227 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 TSPY26PQ9H489 355 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 USP29Q9HBJ7 922 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ABHD10Q9NUJ1 306 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 CTTNBP2NLQ9P2B4 639 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 LCMT1Q9UIC8 334 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ASXL3Q9C0F0 2248 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 MYLKQ15746 1914 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 ZFHX4Q86UP3 3567 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 DMXL2Q8TDJ6 3036 aa9.13□□□□□ -0.95
PDLIM5-209ENST00000506632 C2orf72A6NCS6 295 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 TMEM110-MUSTN1A8MSY1 372 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 TPP1O14773 563 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 MFSD11O43934 449 aa9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 LZTS3O60299 673 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-209ENST00000506632 GCATO75600 419 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms