RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 WRAP53Q9BUR4 548 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 C1QTNF2Q9BXJ5 285 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 SLC17A9Q9BYT1 436 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 BRD8Q9H0E9 1235 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 EFR3BQ9Y2G0 817 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 ANKRD6Q9Y2G4 727 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 SNX11Q9Y5W9 270 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 KNL1Q8NG31 2342 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 PRAMEF26H0Y7S4 382 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 H0Y8X5 98 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 APOC4-APOC2K7ER74 178 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 VILLO15195 856 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 RAD51BO15315 384 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 NRDCO43847 1150 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 MMP20O60882 483 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 APOC2P02655 101 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 MMP2P08253 660 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 HNRNPA2B1P22626 353 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 XPAP23025 273 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 CTSKP43235 329 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 ELP6Q0PNE2 266 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 RALGDSQ12967 914 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 GCNT7Q6ZNI0 430 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 ADAT2Q7Z6V5 191 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 ZC3H18Q86VM9 953 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 UBL4BQ8N7F7 174 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 QKIQ96PU8 341 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 KLF6Q99612 283 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 ZDHHC5Q9C0B5 715 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 IL21RQ9HBE5 538 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 SEPT10Q9P0V9 454 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 RAI2Q9Y5P3 530 aa18.37■□□□□ 0.53
PDLIM7-216ENST00000506537 TM4SF5O14894 197 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 FZD6O60353 706 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 PGLSO95336 258 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 PAK4O96013 591 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 CPP00450 1065 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 PTPN3P26045 913 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 CLDN2P57739 230 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 WASHC5Q12768 1159 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 NOMO1Q15155 1222 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 BZW1Q7L1Q6 419 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 ZSCAN30Q86W11 494 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 ACTL9Q8TC94 416 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 CXorf40AQ8TE69 158 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 PDCD6IPQ8WUM4 868 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 TFB1MQ8WVM0 346 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 DNAAF2Q9NVR5 837 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 FNDC3AQ9Y2H6 1198 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 COQ6Q9Y2Z9 468 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 PCDHB9Q9Y5E1 797 aa18.36■□□□□ 0.53
PDLIM7-216ENST00000506537 ASCC3Q8N3C0 2202 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 NEBLO76041 1014 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 PDHA1P08559 390 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 C6P13671 934 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 AKT2P31751 481 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 ID4P47928 161 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 LIG3P49916 1009 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 ATXN3P54252 364 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 NXPH1P58417 271 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 SKOR1P84550 965 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 PTPRRQ15256 657 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 HLA-BQ31612 363 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 UAP1L1Q3KQV9 507 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 ERAP2Q6P179 960 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 KDM7AQ6ZMT4 941 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 DPPA4Q7L190 304 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 SPATS2Q86XZ4 545 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 MFSD2AQ8NA29 543 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 PIH1D2Q8WWB5 315 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 ASB12Q8WXK4 309 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 AGAP3Q96P47 875 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 SMIM14Q96QK8 99 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 FAM118BQ9BPY3 351 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 TDRD1Q9BXT4 1180 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 GAREM1Q9H706 876 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 C10orf88Q9H8K7 445 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 B4GALT6Q9UBX8 382 aa18.35■□□□□ 0.53
PDLIM7-216ENST00000506537 TLR4O00206 839 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 KCNK3O14649 394 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 PRLP01236 227 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 GM2AP17900 193 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 CES1P23141 567 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 CD86P42081 329 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 C21orf59P57076 290 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 POLR2LP62875 67 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 FAM193AP78312 1265 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 KLF1Q13351 362 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 STAT4Q14765 748 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 TEX44Q53QW1 395 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 SLC45A4Q5BKX6 768 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 ARMC12Q5T9G4 340 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 MEI1Q5TIA1 1274 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 IL27RAQ6UWB1 636 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 ABI3BPQ7Z7G0 1075 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 IQCHQ86VS3 1027 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 PAF1Q8N7H5 531 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 BMFQ96LC9 184 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 LENG8Q96PV6 779 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms