RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 HS3ST2Q9Y278 367 aa9.44□□□□□ -0.9
TPM3-218ENST00000505010 MTF2Q9Y483 593 aaPredicted RBP9.44□□□□□ -0.9
TPM3-218ENST00000505010 CXorf51AA0A1B0GTR3 108 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 EXOC1LA0A1B0GW35 172 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 GOLGA6L10A6NI86 522 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.43□□□□□ -0.9
TPM3-218ENST00000505010 BNIP3LO60238 219 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 OPA1O60313 960 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 SPAG6O75602 509 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 ASLP04424 464 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 IVLP07476 585 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 CISD3P0C7P0 127 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 TSHRP16473 764 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 CA4P22748 312 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 GJA4P35212 333 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 NPY2RP49146 381 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 EIF3BP55884 814 aaKnown RBP9.43□□□□□ -0.9
TPM3-218ENST00000505010 GPX6P59796 221 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 AP1S1P61966 158 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 CDK18Q07002 472 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 CBLBQ13191 982 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 SEPT6Q14141 434 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 GALNT3Q14435 633 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 POU6F1Q14863 301 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 KRT71Q3SY84 523 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 HSP90B2PQ58FF3 399 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 SIRPB2Q5JXA9 342 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 CERCAMQ5T4B2 595 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 TMEM215Q68D42 235 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 NCEH1Q6PIU2 408 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 UNC5AQ6ZN44 842 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 KIAA0907Q7Z7F0 614 aaPredicted RBP9.43□□□□□ -0.9
TPM3-218ENST00000505010 SH2D3CQ8N5H7 860 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 PAF1Q8N7H5 531 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 OR6K2Q8NGY2 324 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 CSGALNACT1Q8TDX6 532 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 SORCS1Q8WY21 1168 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 TTC17Q96AE7 1141 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 TADA1Q96BN2 335 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 ZNF669Q96BR6 464 aaPredicted RBP9.43□□□□□ -0.9
TPM3-218ENST00000505010 NELL2Q99435 816 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 TRIM56Q9BRZ2 755 aaKnown RBP9.43□□□□□ -0.9
TPM3-218ENST00000505010 TDRD1Q9BXT4 1180 aaKnown RBP9.43□□□□□ -0.9
TPM3-218ENST00000505010 CEP44Q9C0F1 390 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 IL22Q9GZX6 179 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 CENPHQ9H3R5 247 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 EVLQ9UI08 416 aaPredicted RBP9.43□□□□□ -0.9
TPM3-218ENST00000505010 FBXO10Q9UK96 956 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 SLC27A6Q9Y2P4 619 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 RAI2Q9Y5P3 530 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 SCN8AQ9UQD0 1980 aa9.43□□□□□ -0.9
TPM3-218ENST00000505010 TCRBV9S1A1TA0A576 114 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 CCDC78A2IDD5 438 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 AGPSO00116 658 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 LRP3O75074 770 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 PIGNO95427 931 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 NDST3O95803 873 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 GSRP00390 522 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 FGF1P05230 155 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 ATP5BP06576 529 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 ATXN1LP0C7T5 689 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 MYZAPP0CAP1 466 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 HLA-DPA1P20036 260 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 CD72P21854 359 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 STX2P32856 288 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 NNMTP40261 264 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 OPRD1P41143 372 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 MAPK8P45983 427 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 SLCO1A2P46721 670 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 ST8SIA6P61647 398 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 SNRPD1P62314 119 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 PFKPQ01813 784 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 NSUN2Q08J23 767 aaKnown RBP eCLIP9.42□□□□□ -0.9
TPM3-218ENST00000505010 TRAF2Q12933 501 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 STAT4Q14765 748 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 EFTUD2Q15029 972 aaKnown RBP eCLIP9.42□□□□□ -0.92e-18■■■■□ 20.8
TPM3-218ENST00000505010 DLG2Q15700 870 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 SLC1A5Q15758 541 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 LPAL2Q16609 132 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 LONRF1Q17RB8 773 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 KLHL38Q2WGJ6 581 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 DGKKQ5KSL6 1271 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 NAIF1Q69YI7 327 aaPredicted RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 LAIR1Q6GTX8 287 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 DENND5AQ6IQ26 1287 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 RANBP10Q6VN20 620 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 C3orf62Q6ZUJ4 267 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 Q6ZVU0 165 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 MTERF4Q7Z6M4 381 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 PCDH20Q8N6Y1 951 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 LPCAT1Q8NF37 534 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 OR2AP1Q8NGE2 309 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 GSDMBQ8TAX9 411 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 EPS8L3Q8TE67 593 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 FBF1Q8TES7 1133 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 PDCD6IPQ8WUM4 868 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 ISG20Q96AZ6 181 aaKnown RBP9.42□□□□□ -0.9
TPM3-218ENST00000505010 CLDN23Q96B33 292 aa9.42□□□□□ -0.9
TPM3-218ENST00000505010 MYO19Q96H55 970 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms