RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 RIOX2Q8IUF8 465 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 GPC2Q8N158 579 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 AGGF1Q8N302 714 aaeCLIP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 EMC1Q8N766 993 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZSCAN1Q8NBB4 408 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 AGBL3Q8NEM8 1001 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PJA1Q8NG27 643 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SETD7Q8WTS6 366 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SEMA4DQ92854 862 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 USP13Q92995 863 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 VWCEQ96DN2 955 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PABPC5Q96DU9 382 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PLEKHA8Q96JA3 519 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ROGDIQ9GZN7 287 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 UNC93B1Q9H1C4 597 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ISCUQ9H1K1 167 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 DDX4Q9NQI0 724 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ADARB2Q9NS39 739 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 RIC8BQ9NVN3 520 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 UBA2Q9UBT2 640 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC39A10Q9ULF5 831 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PRKAB1Q9Y478 270 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TRAF6Q9Y4K3 522 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PSAT1Q9Y617 370 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PITPNM2Q9BZ72 1349 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 STK36Q9NRP7 1315 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 E5RI56 91 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC7A4O43246 635 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC37A4O43826 429 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SGPL1O95470 568 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 C22orf31O95567 290 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TP53P04637 393 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 KRT7P08729 469 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 H2AFB1P0C5Y9 115 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 H2AFB2P0C5Z0 115 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 AVPR1AP37288 418 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ABCG1P45844 678 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF157P51786 506 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 MEF2AQ02078 507 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 FOLH1Q04609 750 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 NR1H3Q13133 447 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 MTMR2Q13614 643 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 MPP2Q14168 576 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 KPNB1Q14974 876 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 C11orf63Q6NUN7 778 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM179Q6ZVK1 233 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 FKBP9P1Q75LS8 142 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ARMCX2Q7L311 632 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 LDHDQ86WU2 507 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ERI1Q8IV48 349 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 EFHBQ8N7U6 833 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ADAMTS19Q8TE59 1207 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PSPC1Q8WXF1 523 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SEC14L1Q92503 715 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 E2F7Q96AV8 911 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF669Q96BR6 464 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 KIF12Q96FN5 646 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 NSL1Q96IY1 281 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 OLFM3Q96PB7 478 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 ZNF184Q99676 751 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TMEM121Q9BTD3 319 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TRAF4Q9BUZ4 470 aaPredicted RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TBC1D10AQ9BXI6 508 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 TRIM8Q9BZR9 551 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CDC42EP4Q9H3Q1 356 aaKnown RBP3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 MANSC1Q9H8J5 431 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 COG4Q9H9E3 785 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 PLSCR3Q9NRY6 295 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 RNF19AQ9NV58 838 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 GID8Q9NWU2 228 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 UBP1Q9NZI7 540 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 KIF17Q9P2E2 1029 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SLC13A4Q9UKG4 626 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CHKBQ9Y259 395 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 SNX13Q9Y5W8 968 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 CPQQ9Y646 472 aa3.7□□□□□ -1.82
PCDH11X-208ENST00000504220 HMX3A6NHT5 357 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 PDXKO00764 312 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ANGPT2O15123 496 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 RGS5O15539 181 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 HUS1O60921 280 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 TSPAN9O75954 239 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ENDOD1O94919 500 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SEMA3DO95025 777 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ERBB2P04626 1255 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CALB1P05937 261 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CBR1P16152 277 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 EPB42P16452 691 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 ITIH2P19823 946 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 OSBPP22059 807 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 CCND2P30279 289 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 COILP38432 576 aaPredicted RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SPAM1P38567 509 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 BMXP51813 675 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 KPNA2P52292 529 aaKnown RBP3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 GDF10P55107 478 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SEC13P55735 322 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 SOX10P56693 466 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 HSF2Q03933 536 aa3.69□□□□□ -1.82
PCDH11X-208ENST00000504220 AP3B2Q13367 1082 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms