RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 RBP5P82980 135 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 ITGADQ13349 1161 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 SGCAQ16586 387 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 ZC3H12BQ5HYM0 836 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 ATAD3BQ5T9A4 648 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 UNC5AQ6ZN44 842 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 BEND4Q6ZU67 534 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 LRRC6Q86X45 466 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 SIMC1Q8NDZ2 872 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 FBXL13Q8NEE6 735 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 LMO3Q8TAP4 145 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 SPATA18Q8TC71 538 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 TAS1R2Q8TE23 839 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 STON2Q8WXE9 905 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 ZNF558Q96NG5 402 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 GAL3ST1Q99999 423 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 XYLT2Q9H1B5 865 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 VPS11Q9H270 941 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 EPB41L4BQ9H329 900 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 EPS8L2Q9H6S3 715 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 ERVMER34-1Q9H9K5 563 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 DIABLOQ9NR28 239 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 AAASQ9NRG9 546 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 THG1LQ9NWX6 298 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 TAB2Q9NYJ8 693 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 TXNDC16Q9P2K2 825 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 EPS15L1Q9UBC2 864 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 CACNG4Q9UBN1 327 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 ADGRE2Q9UHX3 823 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 MSRAQ9UJ68 235 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 SMG5Q9UPR3 1016 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 PLXNA4Q9HCM2 1894 aa9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 COL4A4P53420 1690 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-207ENST00000503974 ZNF98A6NK75 572 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 LGALS16A8MUM7 142 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ASS1P00966 412 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ZNF23P17027 643 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SOX11P35716 441 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 PPM1AP35813 382 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 OR1G1P47890 313 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 MYL7Q01449 175 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 TARDBPQ13148 414 aaKnown RBP eCLIP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 NCOA4Q13772 614 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SSPNQ14714 243 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 LRRC14Q15048 493 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 PLEKHG6Q3KR16 790 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 TMEM173Q86WV6 379 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ATAD1Q8NBU5 361 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 FAM172AQ8WUF8 416 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 THAP11Q96EK4 314 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 MAGEB18Q96M61 343 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ZNF560Q96MR9 790 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SERINC2Q96SA4 455 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 COLEC11Q9BWP8 271 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SLC2A11Q9BYW1 496 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 DAPK2Q9UIK4 370 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 VWA8A3KMH1 1905 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 TMEM265A0A087WTH1 108 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 WDR91A4D1P6 747 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 H3BNX3 289 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SSX5O60225 188 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 MOCS3O95396 460 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ITGB1P05556 798 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 RB1P06400 928 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 IGFBP6P24592 240 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ALDH7A1P49419 539 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 TAF6P49848 677 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 MYBPC1Q00872 1141 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 TLR1Q15399 786 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 PLBD1Q6P4A8 553 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 PAOXQ6QHF9 649 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 BTN2A1Q7KYR7 527 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 MAMDC2Q7Z304 686 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 LIMS2Q7Z4I7 341 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SPRED2Q7Z698 418 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 GPR180Q86V85 440 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SLC44A2Q8IWA5 706 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SRRM1Q8IYB3 904 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ZNF680Q8NEM1 530 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SEMA4DQ92854 862 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 PTCD3Q96EY7 689 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 FEM1CQ96JP0 617 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 DEPDC7Q96QD5 511 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 TGS1Q96RS0 853 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 MNTQ99583 582 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 NKX2-4Q9H2Z4 354 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 RMND5AQ9H871 391 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 RIC8BQ9NVN3 520 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 RAB20Q9NX57 234 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 ADAM28Q9UKQ2 775 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 PRG3Q9Y2Y8 225 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 NEU2Q9Y3R4 380 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 CORINQ9Y5Q5 1042 aa9.68□□□□□ -0.86
PDLIM5-207ENST00000503974 EVPLLA8MZ36 301 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms