RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PMS1P54277 932 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 SNX16P57768 344 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 OR1D5P58170 312 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 MC1RQ01726 317 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 SLC6A3Q01959 620 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 LRRC63Q05C16 580 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 DEUP1Q05D60 604 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 RAD51Q06609 339 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 ELP6Q0PNE2 266 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 TMEM52BQ4KMG9 183 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 DCAF12Q5T6F0 453 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 OTUD1Q5VV17 481 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 OLFML1Q6UWY5 402 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 SLC26A9Q7LBE3 791 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 WDTC1Q8N5D0 677 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 ARHGEF2Q92974 986 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 TMEM51Q9NW97 253 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 ZNF212Q9UDV6 495 aa15.95■□□□□ 0.14
PDLIM7-210ENST00000503827 EFCAB7A8K855 629 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 TIMP2P16035 220 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 OAS2P29728 719 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 ACVRL1P37023 503 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 SUOXP51687 545 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 LIMK2P53671 638 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 MTM1Q13496 603 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 CCDC40Q4G0X9 1142 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 KCTD16Q68DU8 428 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 CAPRIN2Q6IMN6 1127 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 HEATR4Q86WZ0 1026 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 NLGN4XQ8N0W4 816 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 EFCAB3Q8N7B9 438 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 ZNF397Q8NF99 534 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 NLGN4YQ8NFZ3 816 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 OR56A4Q8NGH8 313 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 OR1E3Q8WZA6 343 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 VOPP1Q96AW1 172 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 PGAP3Q96FM1 320 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 CCDC34Q96HJ3 373 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 ACP6Q9NPH0 428 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 PRDM8Q9NQV8 689 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 RMND1Q9NWS8 449 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 DKK3Q9UBP4 350 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 HPCAL4Q9UM19 191 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 SRPK3Q9UPE1 567 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 DAAM1Q9Y4D1 1078 aa15.94■□□□□ 0.14
PDLIM7-210ENST00000503827 FAM237AA0A1B0GTK4 181 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 TRIM49BA6NDI0 452 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 CACNB4O00305 520 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 PCCBP05166 539 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 TFE3P19532 575 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 GNLYP22749 145 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 KELP23276 732 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 MAP4P27816 1152 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 RAB15P59190 212 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 RNASE9P60153 205 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 COBLL1Q53SF7 1204 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 ATXN7L2Q5T6C5 722 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 ZNF658Q5TYW1 1059 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 PASD1Q8IV76 773 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 NRSN1Q8IZ57 195 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 GALNT11Q8NCW6 608 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 GDAP1L1Q96MZ0 367 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 TEFMQ96QE5 360 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 TMEM168Q9H0V1 697 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 SYNCQ9H7C4 482 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 UBE2TQ9NPD8 197 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 PILRAQ9UKJ1 303 aa15.93■□□□□ 0.14
PDLIM7-210ENST00000503827 LOC101059948A0A1B0GTJ6 334 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 TMEM202A6NGA9 273 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 B4E171 279 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 MKRN2OSH3BPM6 223 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 ERBB2P04626 1255 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 TCN2P20062 427 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 NR1D1P20393 614 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 CD1CP29017 333 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 TSPAN7P41732 249 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 COPB1P53618 953 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 MAZP56270 477 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 KIAA1024LP59773 190 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 BIRC2Q13490 618 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 NR1D2Q14995 579 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 AGERQ15109 404 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 C16orf46Q6P387 395 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 FOXR2Q6PJQ5 311 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 ZNF438Q7Z4V0 828 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 FAM129CQ86XR2 697 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 OR4D9Q8NGE8 314 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 CCL4L1Q8NHW4 92 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 SPATA32Q96LK8 384 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 CEP63Q96MT8 703 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 INTS2Q9H0H0 1204 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 FGF22Q9HCT0 170 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 MRPL40Q9NQ50 206 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 CUEDC1Q9NWM3 386 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 PPARGC1AQ9UBK2 798 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 KCTD3Q9Y597 815 aa15.92■□□□□ 0.14
PDLIM7-210ENST00000503827 A1L4Q6 167 aa15.91■□□□□ 0.14
PDLIM7-210ENST00000503827 TNFRSF10CO14798 259 aa15.91■□□□□ 0.14
PDLIM7-210ENST00000503827 IGSF6O95976 241 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms