RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 HEPHL1Q6MZM0 1159 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CES5AQ6NT32 575 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CDC73Q6P1J9 531 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM71Q6P5X7 295 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CPLX2Q6PUV4 134 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 SLC46A3Q7Z3Q1 461 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TBC1D26Q86UD7 250 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 NGEFQ8N5V2 710 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CCDC89Q8N998 374 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TDRD9Q8NDG6 1382 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ZMIZ2Q8NF64 920 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CADM4Q8NFZ8 388 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 RNF183Q96D59 192 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF479Q96JC4 524 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF333Q96JL9 665 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 YME1L1Q96TA2 773 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 BARD1Q99728 777 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 WDR77Q9BQA1 342 aaPredicted RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 CHCHD6Q9BRQ6 235 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 H2AFJQ9BTM1 129 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 POLDIP3Q9BY77 421 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 GLIS2Q9BZE0 524 aaPredicted RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 TASP1Q9H6P5 420 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 MVB12BQ9H7P6 319 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 MRPL44Q9H9J2 332 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 PLEKHA5Q9HAU0 1116 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 BRF2Q9HAW0 419 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 FZD3Q9NPG1 666 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 DECR2Q9NUI1 292 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 SPATS2LQ9NUQ6 558 aaKnown RBP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 A4GNTQ9UNA3 340 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P35-201ENST00000503360 RABGAP1Q9Y3P9 1069 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 PSAT1Q9Y617 370 aa2.55□□□□□ -2
HMGB1P35-201ENST00000503360 NOTCH2Q04721 2471 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TTC36A6NLP5 189 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 LRRC53A6NM62 1247 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 KLRF2D3W0D1 207 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 EBAG9O00559 213 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TNFRSF13BO14836 293 aaPredicted RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 MDM4O15151 490 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 ZBED4O75132 1171 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 ATP2C2O75185 946 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 SEC14L2O76054 403 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 EPN2O95208 641 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 CLDN7O95471 211 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 IFNA2P01563 188 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 KLKB1P03952 638 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 MMP3P08254 477 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 MYZAPP0CAP1 466 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TFPIP10646 304 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 IRF1P10914 325 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PCNAP12004 261 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 CHRNB2P17787 502 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 SRD5A1P18405 259 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 MCCP23508 829 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TBXAS1P24557 533 aaPredicted RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PSMA4P25789 261 aaKnown RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 NFKBIAP25963 317 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 RYKP34925 604 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 COPB2P35606 906 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 ARL3P36405 182 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PPP3CCP48454 512 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 CDH12P55289 794 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 RPL7AP62424 266 aaKnown RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM115Q12893 351 aaPredicted RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PDE1CQ14123 709 aaPredicted RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 RNPS1Q15287 305 aaKnown RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 GSTA3Q16772 222 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PLEKHO1Q53GL0 409 aaPredicted RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 Q5PR19 223 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 SNX30Q5VWJ9 437 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TXNDC8Q6A555 127 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 ZNF324BQ6AW86 544 aaPredicted RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 NCAPH2Q6IBW4 605 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 LRRC8EQ6NSJ5 796 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 MZT2BQ6NZ67 158 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 SLC16A12Q6ZSM3 486 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TRAPPC11Q7Z392 1133 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PXKQ7Z7A4 578 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TDRPQ86YL5 185 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 DHX40Q8IX18 779 aaKnown RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 C1orf131Q8NDD1 294 aaKnown RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 MCPH1Q8NEM0 835 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 ENGASEQ8NFI3 743 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 GJC3Q8NFK1 279 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 SLC35F5Q8WV83 523 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 INPP5DQ92835 1189 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TMEM18Q96B42 140 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PERPQ96FX8 193 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 ZC3HAV1LQ96H79 300 aaKnown RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 BBS4Q96RK4 519 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 SIN3AQ96ST3 1273 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 NPFFR1Q9GZQ6 430 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 CDT1Q9H211 546 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 PRKRIP1Q9H875 184 aaPredicted RBP2.54□□□□□ -2
HMGB1P35-201ENST00000503360 CD93Q9NPY3 652 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 DIAPH3Q9NSV4 1193 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 TBC1D22BQ9NU19 505 aa2.54□□□□□ -2
HMGB1P35-201ENST00000503360 LIMA1Q9UHB6 759 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms