RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 GGT7Q9UJ14 662 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 MYO6Q9UM54 1294 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 SNX10Q9Y5X0 201 aa6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ARHGEF17Q96PE2 2063 aaPredicted RBP6.16□□□□□ -1.42
LSM3P4-201ENST00000502948 ZFC3H1O60293 1989 aaKnown RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 A0A1W2PQC6 194 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 A0A1W2PQM1 296 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ANKRD62A6NC57 917 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 RASA4BC9J798 803 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 PDE2AO00408 941 aaPredicted RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 TRAFD1O14545 582 aaPredicted RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 HGSO14964 777 aaPredicted RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 MUSKO15146 869 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 RASA4O43374 803 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 NOBOXO60393 691 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 PRAMEF11O60813 436 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 MMP20O60882 483 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 TNFSF15O95150 251 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 GJB6O95452 261 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 TNFP01375 233 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 TPM2P07951 284 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CCDC172P0C7W6 258 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ATP1A3P13637 1013 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CTSEP14091 401 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 DESP17661 470 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 NFKBIAP25963 317 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 EPHB2P29323 1055 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 UGT1A5P35504 534 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 MMP12P39900 470 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 SRP54P61011 504 aaKnown RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 RHOAP61586 193 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 HLTFQ14527 1009 aaKnown RBP eCLIP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 INPP5AQ14642 412 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 IRF4Q15306 451 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CYTH1Q15438 398 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CDO1Q16878 200 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CLEC16AQ2KHT3 1053 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ALG11Q2TAA5 492 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 WSCD2Q2TBF2 565 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 C2CD6Q53TS8 623 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 RALGPS1Q5JS13 557 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CERCAMQ5T4B2 595 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 TAF3Q5VWG9 929 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 RBM43Q6ZSC3 357 aaKnown RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 MON1BQ7L1V2 547 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 RAB11FIP2Q7L804 512 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 VPS36Q86VN1 386 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 NLRP8Q86W28 1048 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CBARPQ8N350 705 aaPredicted RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 RYBPQ8N488 228 aaPredicted RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 FBXO39Q8N4B4 442 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 LZTR1Q8N653 840 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CCDC185Q8N715 623 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 JOSD2Q8TAC2 188 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 FNIP1Q8TF40 1166 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 WDR92Q96MX6 357 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ZNF599Q96NL3 588 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 PSKH2Q96QS6 385 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 GFM1Q96RP9 751 aaKnown RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CMKLR1Q99788 373 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 DPYSL5Q9BPU6 564 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 NCAPGQ9BPX3 1015 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 CNPY3Q9BT09 278 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 SELENOOQ9BVL4 669 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 TCEAL2Q9H3H9 227 aaPredicted RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 LRRN3Q9H3W5 708 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 TRNAU1APQ9NX07 287 aaKnown RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ADAM22Q9P0K1 906 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 SEPT10Q9P0V9 454 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 LHX3Q9UBR4 397 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 UBA2Q9UBT2 640 aaPredicted RBP6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 FZD10Q9ULW2 581 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 DOLKQ9UPQ8 538 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ITM2BQ9Y287 266 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 SIK3Q9Y2K2 1263 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ATP8A1Q9Y2Q0 1164 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 PCDHGA3Q9Y5H0 932 aa6.15□□□□□ -1.42
LSM3P4-201ENST00000502948 ZNF462Q96JM2 2506 aa6.15□□□□□ -1.43
LSM3P4-201ENST00000502948 ARHGAP42A6NI28 874 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 PSMD11O00231 422 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 CACNB4O00305 520 aaPredicted RBP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 EFSO43281 561 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SOCS5O75159 536 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 GFPT2O94808 682 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 MYF5P13349 255 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 XPAP23025 273 aaPredicted RBP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SERPINA4P29622 427 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 SLC5A2P31639 672 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 GKP32189 559 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 HSPA9P38646 679 aaKnown RBP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 GPR3P46089 330 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 LIG3P49916 1009 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 CSRP3P50461 194 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 RENBPP51606 427 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 AP1S1P61966 158 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 IL10RBQ08334 325 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 RALGDSQ12967 914 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 C1orf61Q13536 156 aa6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 TRA2AQ13595 282 aaKnown RBP eCLIP6.14□□□□□ -1.43
LSM3P4-201ENST00000502948 C14orf28Q4W4Y0 310 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms