RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 FAM149AA5PLN7 773 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 MDM4O15151 490 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 OR6B1O95007 311 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 GSSP48637 474 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 LDLRAP1Q5SW96 308 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 PKN3Q6P5Z2 889 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 SPATA6LQ8N4H0 392 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 OTULINQ96BN8 352 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 TEX264Q9Y6I9 313 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 MLYCDO95822 493 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 LTFP02788 710 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 VTNP04004 478 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 PCNAP12004 261 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 FSTL4Q6MZW2 842 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 GATA6Q92908 595 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 RPRD1AQ96P16 312 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 CRYL1Q9Y2S2 319 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 C17orf102A2RUQ5 167 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 CCDC85CA6NKD9 419 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 RGS14O43566 566 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 CCNKO75909 580 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 IPO13O94829 963 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 THRBP10828 461 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 BNC1Q01954 994 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 MERTKQ12866 999 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 TMEM132BQ14DG7 1078 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 TRIP4Q15650 581 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 MSS51Q4VC12 460 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 TLK2Q86UE8 772 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 BSNDQ8WZ55 320 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 EPB41L4BQ9H329 900 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 ZNF395Q9H8N7 513 aaPredicted RBP17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 TRIM39Q9HCM9 518 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 KRT84Q9NSB2 600 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 SIRPGQ9P1W8 387 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 MYH7BA7E2Y1 1941 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 TSNQ15631 228 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 MFSD4BQ5TF39 518 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 IL27RAQ6UWB1 636 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 RNF19BQ6ZMZ0 732 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 DCP1BQ8IZD4 617 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 CCDC106Q9BWC9 280 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 COLEC11Q9BWP8 271 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 SPATC1LQ9H0A9 340 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 WBP11Q9Y2W2 641 aaKnown RBP17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 LRRC37A3O60309 1634 aa17.3■□□□□ 0.36
HMGXB3-201ENST00000502717 BTN3A1O00481 513 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 IL23RQ5VWK5 629 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 MILR1Q7Z6M3 343 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 DAW1Q8N136 415 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ADAM32Q8TC27 787 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 PKP2Q99959 881 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 CLPBQ9H078 707 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ELOVL6Q9H5J4 265 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 SF3B1O75533 1304 aaKnown RBP eCLIP17.29■□□□□ 0.365e-6■■■■■ 133
HMGXB3-201ENST00000502717 SEC22BO75396 215 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 CST3P01034 146 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 KLF1Q13351 362 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 FAM187BQ17R55 369 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 EDEM1Q92611 657 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 HTRA1Q92743 480 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 LENG9Q96B70 501 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ACTR8Q9H981 624 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 CRLS1Q9UJA2 301 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 FAM159BA6NKW6 160 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 MSCO60682 206 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 CPSF4O95639 269 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 T-ENOLP0DO92 83 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ERCC2P18074 760 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 TSPAN8P19075 237 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 TRIM32Q13049 653 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 OR52E8Q6IFG1 317 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 SPPL2AQ8TCT8 520 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 APOBEC3GQ9HC16 384 aaKnown RBP17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ADPRHL2Q9NX46 363 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 PHF24Q9UPV7 400 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 PCDHAC2Q9Y5I4 1007 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 PRR23AA6NEV1 266 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ODC1P11926 461 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 CERCAMQ5T4B2 595 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 SLC26A9Q7LBE3 791 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 OR12D3Q9UGF7 316 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 TELO2Q9Y4R8 837 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 ASB3Q9Y575 518 aa17.29■□□□□ 0.36
HMGXB3-201ENST00000502717 CXorf49A8MYA2 514 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 NPHS1O60500 1241 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 MAFO75444 373 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 SLC22A3O75751 556 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 ALOX15P16050 662 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 S100A3P33764 101 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 MATKP42679 507 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 MOGQ16653 247 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 LCLAT1Q6UWP7 414 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 NCCRP1Q6ZVX7 275 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 STRADAQ7RTN6 431 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 OFCC1Q8IZS5 231 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 C19orf60Q96EN9 201 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 CDV3Q9UKY7 258 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 TNPO3Q9Y5L0 923 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms