RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 COQ10AQ96MF6 247 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TRIM54Q9BYV2 358 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PRPF19Q9UMS4 504 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ARGFXA6NJG6 315 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 IFRD1O00458 451 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ZBTB8OSQ8IWT0 167 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PIH1D2Q8WWB5 315 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SLC38A4Q969I6 547 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SAGE1Q9NXZ1 904 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 BFARQ9NZS9 450 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 KIAA1257Q9ULG3 409 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MAP3K2Q9Y2U5 619 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PI4KAP2A4QPH2 592 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RFC4P35249 363 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MNDAP41218 407 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 GTF2H3Q13889 308 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PKN1Q16512 942 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TPRG1LQ5T0D9 272 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RNF148Q8N7C7 305 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PI4KAP1Q8N8J0 262 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ITFG1Q8TB96 612 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MAP4K1Q92918 833 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 GAD1Q99259 594 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 REV1Q9UBZ9 1251 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 E7EWF7 191 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 NIPSNAP2O75323 286 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 DDAH1O94760 285 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 C8BP07358 591 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CYP11B1P15538 503 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 EIF2DP41214 584 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 POLD2P49005 469 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RPL13AP3Q6NVV1 102 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SLC34A3Q8N130 599 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TM9SF4Q92544 642 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ACAD8Q9UKU7 415 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 DAPK1P53355 1430 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 A8MVJ9 347 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PRKCGP05129 697 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MAPK3P27361 379 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PPP5CP53041 499 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 BEND5Q7L4P6 421 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF551Q7Z340 670 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CMTR1Q8N1G2 835 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SLC15A4Q8N697 577 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 EFCAB3Q8N7B9 438 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CCNYQ8ND76 341 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 FAM167AQ96KS9 214 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RIT2Q99578 217 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ANKRA2Q9H9E1 313 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SNRPD2P62316 118 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MYL7Q01449 175 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 IL18Q14116 193 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 KDELC1Q6UW63 502 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RIOX2Q8IUF8 465 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ZC3H7AQ8IWR0 971 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 UBQLNLQ8IYU4 475 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 OR6P1Q8NGX9 317 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RP9Q8TA86 221 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 HIPK2Q9H2X6 1198 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SIAEQ9HAT2 523 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 GJB4Q9NTQ9 266 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 POU2F3Q9UKI9 436 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PPIEQ9UNP9 301 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 B3GNT3Q9Y2A9 372 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PCDHGA6Q9Y5G7 932 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 LAD1O00515 517 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MTHFD1P11586 935 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 DDCP20711 480 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 PDK4Q16654 411 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 MOB1BQ7L9L4 216 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SKA3Q8IX90 412 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 TMEM35BQ8NCS4 154 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ZBED3Q96IU2 234 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CYP3A43Q9HB55 503 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 VAPAQ9P0L0 249 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 GMPPBQ9Y5P6 360 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 LCKP06239 509 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 NKX6-1P78426 367 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 SREBF2Q12772 1141 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 DPYDQ12882 1025 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ACVR2BQ13705 512 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ZNF705AQ6ZN79 300 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 DNAJC10Q8IXB1 793 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CHPT1Q8WUD6 406 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 RALAP11233 206 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 UBA1P22314 1058 aaKnown RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 DCDC1P59894 354 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 GLO1Q04760 184 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 FMR1Q06787 632 aaKnown RBP eCLIP4.8□□□□□ -1.641e-323■■■■■ 46
NEAT1-202ENST00000501122 ITKQ08881 620 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 KLHL24Q6TFL4 600 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 LRFN5Q96NI6 719 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 DNTTIP1Q9H147 329 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ITGA11Q9UKX5 1188 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 ADGRE1Q14246 886 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 KRBOX4Q5JUW0 171 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CCBE1Q6UXH8 406 aaPredicted RBP4.8□□□□□ -1.64
NEAT1-202ENST00000501122 POLE4Q9NR33 117 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 VPS72Q15906 364 aa4.8□□□□□ -1.64
NEAT1-202ENST00000501122 CRY1Q16526 586 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms