RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 OTOP3Q7RTS5 596 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 GSDMBQ8TAX9 411 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 ARNTL2Q8WYA1 636 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 OTUB2Q96DC9 234 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 TCEAL4Q96EI5 215 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 STAMBPL1Q96FJ0 436 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 CYTH2Q99418 400 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 IL22Q9GZX6 179 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 TLE6Q9H808 572 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 SFXN1Q9H9B4 322 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 VPS37BQ9H9H4 285 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 PLAC1Q9HBJ0 212 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 ARNT2Q9HBZ2 717 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 ATP13A1Q9HD20 1204 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 TDP1Q9NUW8 608 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 BFARQ9NZS9 450 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 VPS18Q9P253 973 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 CHMP2BQ9UQN3 213 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 OR51B4Q9Y5P0 310 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 ACTL7BQ9Y614 415 aa7.76□□□□□ -1.17
CDC42-205ENST00000498236 A0A0D9SEW6 157 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 CCDC195A0A1B0GUA6 201 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 CCDC85CA6NKD9 419 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 PER2O15055 1255 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 TBL1XO60907 577 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 ZMPSTE24O75844 475 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 NEBLO76041 1014 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 LUC7L3O95232 432 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 EPOP01588 193 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 PF4P02776 101 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 PGAM1P18669 254 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 GCAP28676 217 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 SSTR1P30872 391 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 PLK1P53350 603 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 GEMIN4P57678 1058 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 CBX1P83916 185 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 NAB1Q13506 487 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 CAMK2GQ13555 558 aaPredicted RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 SLC12A1Q13621 1099 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 ZNF77Q15935 545 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 LONRF1Q17RB8 773 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 INO80DQ53TQ3 878 aaPredicted RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 RALGPS1Q5JS13 557 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 HP1BP3Q5SSJ5 553 aaPredicted RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 FAM182AQ5T1J6 154 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 SYCP2LQ5T4T6 812 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 STXBP5Q5T5C0 1151 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 FYB2Q5VWT5 728 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 KDELC1Q6UW63 502 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 RANBP10Q6VN20 620 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 KDM7AQ6ZMT4 941 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 UNC5AQ6ZN44 842 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 ADGRD2Q7Z7M1 963 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 PRPF39Q86UA1 669 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 TMEM135Q86UB9 458 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 WFDC8Q8IUA0 241 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 SULF2Q8IWU5 870 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 BBS7Q8IWZ6 715 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 BBS5Q8N3I7 341 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 ARFGAP2Q8N6H7 521 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 ZNF557Q8N988 423 aaPredicted RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 TDRD5Q8NAT2 981 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 OR7D4Q8NG98 312 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 OR52K2Q8NGK3 314 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 FIBINQ8TAL6 211 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 UHMK1Q8TAS1 419 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 ARRDC2Q8TBH0 407 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 SH3RF2Q8TEC5 729 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 USP33Q8TEY7 942 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 USP13Q92995 863 aaPredicted RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 PPP2R3CQ969Q6 453 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 TTC17Q96AE7 1141 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 PABPC5Q96DU9 382 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 MRPL38Q96DV4 380 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 PSKH2Q96QS6 385 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 XPO6Q96QU8 1125 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 TBL1YQ9BQ87 522 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 MGME1Q9BQP7 344 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 FEM1AQ9BSK4 669 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 POLR1EQ9GZS1 481 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 NKX2-4Q9H2Z4 354 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 SOX17Q9H6I2 414 aaPredicted RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 KIF9Q9HAQ2 790 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 SLC28A3Q9HAS3 691 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 PRDM6Q9NQX0 595 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 MOCS1Q9NZB8 636 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 SENP1Q9P0U3 644 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 TBC1D14Q9P2M4 693 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 ZNF180Q9UJW8 692 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 ADAM21Q9UKJ8 722 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 TTLL3Q9Y4R7 772 aa7.75□□□□□ -1.17
CDC42-205ENST00000498236 HELZP42694 1942 aaKnown RBP7.75□□□□□ -1.17
CDC42-205ENST00000498236 NOTCH4Q99466 2003 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 CHD7Q9P2D1 2997 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 FAM237BA0A1B0GVD1 139 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 TLDC2A0PJX2 215 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 FAM159BA6NKW6 160 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 H0Y626 953 aa7.74□□□□□ -1.17
CDC42-205ENST00000498236 SLC9A3R1O14745 358 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms