RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NDNFQ8TB73 568 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 NXNL1Q96CM4 212 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 PLEKHA5Q9HAU0 1116 aa13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 CCM2LQ9NUG4 571 aaPredicted RBP13.15□□□□□ -0.3
GAPVD1-220ENST00000497580 DAB1O75553 588 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 HTR1BP28222 390 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 PTPN11Q06124 597 aaPredicted RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SEMA5AQ13591 1074 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 BOLA3Q53S33 107 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 CERCAMQ5T4B2 595 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SCUBE3Q8IX30 993 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SUN5Q8TC36 379 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 DMRTB1Q96MA1 342 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ZDHHC15Q96MV8 337 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ADAMTS10Q9H324 1103 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 A0A0A0MRY4 1105 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SYCE1LA8MT33 242 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 NME4O00746 187 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SNX2O60749 519 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 H2AFYO75367 372 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 PARNO95453 639 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SEC24AO95486 1093 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 MPOP05164 745 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 TGM1P22735 817 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 STEAP4Q687X5 459 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 RFPL4BQ6ZWI9 263 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 CATSPER4Q7RTX7 472 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 KCNMB4Q86W47 210 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 KDM1BQ8NB78 822 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 HMGCLL1Q8TB92 370 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 FIG4Q92562 907 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SPATA13Q96N96 652 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SLC25A23Q9BV35 468 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 BFARQ9NZS9 450 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 COL24A1Q17RW2 1714 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 C2CD4BA6NLJ0 364 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 SLCO1B7G3V0H7 640 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 RAD51BO15315 384 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 MGEA5O60502 916 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 C1QTNF8P60827 252 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 RACK1P63244 317 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 YBX1P67809 324 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 CLDN10P78369 228 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 RPS6KA2Q15349 733 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 MEP1AQ16819 746 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 INTS11Q5TA45 600 aaKnown RBP13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 TBPL2Q6SJ96 375 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 KIAA0408Q6ZU52 694 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ERO1BQ86YB8 467 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ANKRD52Q8NB46 1076 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 RTP4Q96DX8 246 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 CHST12Q9NRB3 414 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
GAPVD1-220ENST00000497580 ANGPT2O15123 496 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 PEX10O60683 326 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 CCNKO75909 580 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 LDLRP01130 860 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 TNNC2P02585 160 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 UGT2B4P06133 528 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 GOT1P17174 413 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 BMPR1AP36894 532 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 ASPAP45381 313 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 CCNA1P78396 465 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 MPP1Q00013 466 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 IL1RL1Q01638 556 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 PPIL2Q13356 520 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 SQLEQ14534 574 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 ATP6AP1Q15904 470 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 JADE1Q6IE81 842 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 ARMC8Q8IUR7 673 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 SCML4Q8N228 414 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 PSD2Q9BQI7 771 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 AGPAT4Q9NRZ5 378 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 HACD3Q9P035 362 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 VANGL2Q9ULK5 521 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 AXIN1O15169 862 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 CABYRO75952 493 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 FARP2O94887 1054 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 RASAL1O95294 804 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 PROZP22891 400 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 IST1P53990 364 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 CCDC58Q4VC31 144 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 PEX5LQ8IYB4 626 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 MAGED4Q96JG8 741 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 DTLQ9NZJ0 730 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 DSEQ9UL01 958 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 HUS1O60921 280 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 SEC14L2O76054 403 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 SFNP31947 248 aa13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
GAPVD1-220ENST00000497580 GRSF1Q12849 480 aaKnown RBP eCLIP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms