RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 FAM126AQ9BYI3 521 aaPredicted RBP20.2■□□□□ 0.82
CTSD-206ENST00000497544 SEMA4GQ9NTN9 838 aa20.2■□□□□ 0.82
CTSD-206ENST00000497544 UBP1Q9NZI7 540 aa20.2■□□□□ 0.82
CTSD-206ENST00000497544 PAK5Q9P286 719 aa20.2■□□□□ 0.82
CTSD-206ENST00000497544 DKK3Q9UBP4 350 aa20.2■□□□□ 0.82
CTSD-206ENST00000497544 AAR2Q9Y312 384 aaKnown RBP20.2■□□□□ 0.82
CTSD-206ENST00000497544 MRFAP1Q9Y605 127 aa20.2■□□□□ 0.82
CTSD-206ENST00000497544 GOLGA6CA6NDK9 693 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 GOLGA6BA6NDN3 693 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 C16orf96A6NNT2 1141 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 PMPCBO75439 489 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 ECEL1O95672 775 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 GAS8O95995 478 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 MT-CYBP00156 380 aaPredicted RBP20.19■□□□□ 0.82
CTSD-206ENST00000497544 KRT14P02533 472 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 ZSCAN5DPP0CG00 497 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 GOLGA6DP0CG33 693 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 RPL22P35268 128 aaKnown RBP20.19■□□□□ 0.82
CTSD-206ENST00000497544 TNNT3P45378 269 aaPredicted RBP20.19■□□□□ 0.82
CTSD-206ENST00000497544 TPMTP51580 245 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 GEMP55040 296 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 POLR2LP62875 67 aaKnown RBP20.19■□□□□ 0.82
CTSD-206ENST00000497544 TRAF2Q12933 501 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 LAIR1Q6GTX8 287 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 BRAT1Q6PJG6 821 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 ERN2Q76MJ5 926 aaKnown RBP20.19■□□□□ 0.82
CTSD-206ENST00000497544 WDR5BQ86VZ2 330 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 LONP2Q86WA8 852 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 VOPP1Q96AW1 172 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 HDAC8Q9BY41 377 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 NEUROG2Q9H2A3 272 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 VPS45Q9NRW7 570 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 GOLGA6AQ9NYA3 693 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 USP36Q9P275 1121 aaKnown RBP20.19■□□□□ 0.82
CTSD-206ENST00000497544 PCYOX1Q9UHG3 505 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 CYP8B1Q9UNU6 501 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 PCDHB9Q9Y5E1 797 aa20.19■□□□□ 0.82
CTSD-206ENST00000497544 DSPP15924 2871 aaKnown RBP20.18■□□□□ 0.82
CTSD-206ENST00000497544 PLK4O00444 970 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 TRAFD1O14545 582 aaPredicted RBP20.18■□□□□ 0.82
CTSD-206ENST00000497544 PSMD3O43242 534 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 HTRA2O43464 458 aaPredicted RBP20.18■□□□□ 0.82
CTSD-206ENST00000497544 METTL18O95568 372 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 TDGF1P13385 188 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 OXTRP30559 389 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 FDFT1P37268 417 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 NEK3P51956 506 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 CNTN1Q12860 1018 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 MPP3Q13368 585 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 PPP1R7Q15435 360 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 SLC14A2Q15849 920 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 PCSK7Q16549 785 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 FAM124AQ86V42 546 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 NDUFAF2Q8N183 169 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 TAB3Q8N5C8 712 aaPredicted RBP20.18■□□□□ 0.82
CTSD-206ENST00000497544 AADATQ8N5Z0 425 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 GLIS1Q8NBF1 620 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 MNS1Q8NEH6 495 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 RLN3Q8WXF3 142 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 LRRC45Q96CN5 670 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 IFT43Q96FT9 208 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 KRT12Q99456 494 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 PCDH9Q9HC56 1237 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 RAB23Q9ULC3 237 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 CHKBQ9Y259 395 aa20.18■□□□□ 0.82
CTSD-206ENST00000497544 PGLSO95336 258 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 RETP07949 1114 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 TIMP2P16035 220 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 DRD3P35462 400 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 P2RY2P41231 377 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 EPHB1P54762 984 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 C2orf54Q08AI8 447 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 IHHQ14623 411 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 TRIP13Q15645 432 aaPredicted RBP20.17■□□□□ 0.82
CTSD-206ENST00000497544 CCDC70Q6NSX1 233 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 PARS2Q7L3T8 475 aaKnown RBP20.17■□□□□ 0.82
CTSD-206ENST00000497544 ZNF572Q7Z3I7 529 aaPredicted RBP20.17■□□□□ 0.82
CTSD-206ENST00000497544 KDELC2Q7Z4H8 507 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 TADA1Q96BN2 335 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 ECHDC3Q96DC8 303 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 OXNAD1Q96HP4 312 aaPredicted RBP20.17■□□□□ 0.82
CTSD-206ENST00000497544 SPACA7Q96KW9 195 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 TDRD1Q9BXT4 1180 aaKnown RBP20.17■□□□□ 0.82
CTSD-206ENST00000497544 BTBD1Q9H0C5 482 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 RAB6BQ9NRW1 208 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 FZD4Q9ULV1 537 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 PHTF1Q9UMS5 762 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 LHX6Q9UPM6 363 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 INVSQ9Y283 1065 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 NUMA1Q14980 2115 aa20.17■□□□□ 0.82
CTSD-206ENST00000497544 TSPAN11A1L157 253 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 E7EVH7 732 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 SLC7A4O43246 635 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 CPP00450 1065 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 ADRB3P13945 408 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 NFKBIAP25963 317 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 LMAN1P49257 510 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 VPS41P49754 854 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 WNT3AP56704 352 aa20.16■□□□□ 0.82
CTSD-206ENST00000497544 CDK18Q07002 472 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms