RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 OBSL1O75147 1896 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GOLGA8QA0A0J9YX86 632 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GOLGA8OA6NCC3 632 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GOLGA8NF8WBI6 632 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 CCL22O00626 93 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 NEMP1O14524 444 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GRID2O43424 1007 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 EFEMP2O95967 443 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 EPOP01588 193 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 SERPINF2P08697 491 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ELF1P32519 619 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 SERPINB5P36952 375 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 CDH4P55283 916 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 SLC25A3Q00325 362 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 PFKPQ01813 784 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 KLF10Q13118 480 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ARHGEF6Q15052 776 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 C1orf146Q5VVC0 180 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 KLHDC10Q6PID8 442 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ACAD11Q709F0 780 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 PLD4Q96BZ4 506 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 CCDC126Q96EE4 140 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 SGF29Q96ES7 293 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 PANX3Q96QZ0 392 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 MGME1Q9BQP7 344 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 GPAMQ9HCL2 828 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 STX18Q9P2W9 335 aaKnown RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ZDHHC2Q9UIJ5 367 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 CDYLQ9Y232 598 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 ZFP37Q9Y6Q3 630 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-220ENST00000496711 BPTFQ12830 3046 aa13.12□□□□□ -0.31
GARNL3-220ENST00000496711 COL4A6Q14031 1691 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 A0A088AWK7 358 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 A0A0D9SEW6 157 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 FKTNO75072 461 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 GJB5O95377 273 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 CXCL10P02778 98 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 COX4I1P13073 169 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 RPL17P18621 184 aaKnown RBP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 TFEBP19484 476 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 OR1D2P34982 312 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 GCKP35557 465 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 ALDH7A1P49419 539 aaKnown RBP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 SESN3P58005 492 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 ACTR3P61158 418 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 SLC34A1Q06495 639 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 NSUN2Q08J23 767 aaKnown RBP eCLIP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 GALNT3Q14435 633 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 HECTD3Q5T447 861 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 IL31Q6EBC2 164 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 FAM45BPQ6NSW5 357 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 OR7D4Q8NG98 312 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 FAM45AQ8TCE6 357 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 BLOC1S5Q8TDH9 187 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 PRICKLE1Q96MT3 831 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 CCDC28BQ9BUN5 200 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 CINPQ9BW66 212 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 NUF2Q9BZD4 464 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 SHCBP1LQ9BZQ2 653 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 WDR55Q9H6Y2 383 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 MARCH4Q9P2E8 410 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 UBA2Q9UBT2 640 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-220ENST00000496711 SEPT3Q9UH03 358 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 KCTD3Q9Y597 815 aa13.11□□□□□ -0.31
GARNL3-220ENST00000496711 ZNF840PA6NDX5 716 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 OR51F1A6NGY5 319 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 H3BNC9 293 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 SLC22A2O15244 555 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 COCHO43405 550 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 RPP40O75818 363 aaKnown RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 S1PR4O95977 384 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 RBP1P09455 135 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 CCDC166P0CW27 439 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 EPHA3P29320 983 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 VHLP40337 213 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 OXCT1P55809 520 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 CUL3Q13618 768 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 ACAP2Q15057 778 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 TRIM67Q6ZTA4 783 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 FRMD7Q6ZUT3 714 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 LDB1Q86U70 411 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 RNF168Q8IYW5 571 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 ACTRT2Q8TDY3 377 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 DNAJC1Q96KC8 554 aaKnown RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 CNDP1Q96KN2 507 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 UBXN10Q96LJ8 280 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 VN1R3Q9BXE9 311 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 AFF4Q9UHB7 1163 aaKnown RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 CORO1CQ9ULV4 474 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-220ENST00000496711 VWA7Q9Y334 891 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 LRRC42Q9Y546 428 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 ARL5AQ9Y689 179 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 LTBP2Q14767 1821 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 A8MT66 165 aa13.1□□□□□ -0.31
GARNL3-220ENST00000496711 TBX10O75333 385 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms