RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 PDE1CQ14123 709 aaPredicted RBP14.58□□□□□ -0.08
PDAP1-204ENST00000496335 DCP2Q8IU60 420 aaKnown RBP14.58□□□□□ -0.08
PDAP1-204ENST00000496335 SLC25A45Q8N413 288 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 TP53I13Q8NBR0 393 aaPredicted RBP14.58□□□□□ -0.08
PDAP1-204ENST00000496335 DENND6BQ8NEG7 585 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 FAM174AQ8TBP5 190 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 CNDP2Q96KP4 475 aaKnown RBP14.58□□□□□ -0.08
PDAP1-204ENST00000496335 RNF157Q96PX1 679 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 NUDCD1Q96RS6 583 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 MGME1Q9BQP7 344 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 NT5MQ9NPB1 228 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 SCUBE2Q9NQ36 999 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 DNAJC28Q9NX36 388 aa14.58□□□□□ -0.08
PDAP1-204ENST00000496335 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.57□□□□□ -0.08
PDAP1-204ENST00000496335 C3orf70A6NLC5 250 aaPredicted RBP14.57□□□□□ -0.08
PDAP1-204ENST00000496335 C1QTNF9BB2RNN3 333 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 TRIM38O00635 465 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 ENC1O14682 589 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 PIAS2O75928 621 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 LCA5LO95447 670 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 C1QTNF9P0C862 333 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 COMTP21964 271 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
PDAP1-204ENST00000496335 NOP2P46087 812 aaKnown RBP14.57□□□□□ -0.08
PDAP1-204ENST00000496335 TRAF2Q12933 501 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 TCEAL1Q15170 157 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 IRF4Q15306 451 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 WSCD2Q2TBF2 565 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 LRRC49Q8IUZ0 686 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 BBS5Q8N3I7 341 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDAP1-204ENST00000496335 TEX26Q8N6G2 289 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 PDCD6IPQ8WUM4 868 aaKnown RBP14.57□□□□□ -0.08
PDAP1-204ENST00000496335 C1QTNF7Q9BXJ2 289 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 GOLPH3Q9H4A6 298 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 KLF15Q9UIH9 416 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 NEUROG3Q9Y4Z2 214 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 PCDHA13Q9Y5I0 950 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 USP24Q9UPU5 2620 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 CACNA1BQ00975 2339 aa14.57□□□□□ -0.08
PDAP1-204ENST00000496335 MATN3O15232 486 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 FFAR2O15552 330 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 HTRA2O43464 458 aaPredicted RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 LZTS3O60299 673 aaPredicted RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 DKK1O94907 266 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 KRT1P04264 644 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 CCNCP24863 283 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 POLR2LP62875 67 aaKnown RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 ITKQ08881 620 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 RALGDSQ12967 914 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 EIF2B5Q13144 721 aaKnown RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 LRRC14Q15048 493 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 PTPRRQ15256 657 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 IFI16Q16666 785 aaKnown RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 LIPIQ6XZB0 460 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 PARGQ86W56 976 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 CCDC170Q8IYT3 715 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 PLD5Q8N7P1 536 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 MAML1Q92585 1016 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 RNF25Q96BH1 459 aaPredicted RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 TSGA13Q96PP4 275 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 PANX2Q96RD6 677 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 SEMA3CQ99985 751 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 TMEM121BQ9BXQ6 578 aaPredicted RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 DTLQ9NZJ0 730 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 B4GALT6Q9UBX8 382 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 PNMA8BQ9ULN7 279 aaPredicted RBP14.56□□□□□ -0.08
PDAP1-204ENST00000496335 MSRB2Q9Y3D2 182 aa14.56□□□□□ -0.08
PDAP1-204ENST00000496335 ASPMQ8IZT6 3477 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 FAM221BA6H8Z2 402 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 SOWAHDA6NJG2 315 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 SIGLEC6O43699 453 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 SPOPO43791 374 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 SOCS5O75159 536 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 NEBLO76041 1014 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 CPP00450 1065 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 CSF2P04141 144 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 GIMD1P0DJR0 217 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 CYLC1P35663 651 aaPredicted RBP14.55□□□□□ -0.08
PDAP1-204ENST00000496335 SLC1A1P43005 524 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 THOP1P52888 689 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 HNRNPKP61978 463 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDAP1-204ENST00000496335 IHHQ14623 411 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 FAM182AQ5T1J6 154 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 LRRC38Q5VT99 294 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 TIGD7Q6NT04 549 aaPredicted RBP14.55□□□□□ -0.08
PDAP1-204ENST00000496335 DHRS13Q6UX07 377 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 UNQ6494/PRO21346Q6UXR6 183 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 DPPA4Q7L190 304 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 MARCH9Q86YJ5 346 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 RHOT1Q8IXI2 618 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 CCNYQ8ND76 341 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 GATA6Q92908 595 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 LGMNQ99538 433 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 TCEAL2Q9H3H9 227 aaPredicted RBP14.55□□□□□ -0.08
PDAP1-204ENST00000496335 RBM22Q9NW64 420 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDAP1-204ENST00000496335 TTLL3Q9Y4R7 772 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 HEY1Q9Y5J3 304 aa14.55□□□□□ -0.08
PDAP1-204ENST00000496335 RECQL5O94762 991 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms