RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 PRAMEF14Q5SWL7 426 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 NAPEPLDQ6IQ20 393 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 KIAA1161Q6NSJ0 714 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 ERAP2Q6P179 960 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 NEK5Q6P3R8 708 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 BRAT1Q6PJG6 821 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 MINDY1Q8N5J2 469 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 CNTD1Q8N815 330 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 ACTL9Q8TC94 416 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 TFB1MQ8WVM0 346 aaKnown RBP9.9□□□□□ -0.82
CALD1-223ENST00000496024 FATE1Q969F0 183 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 RMDN1Q96DB5 314 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 HES6Q96HZ4 224 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 IL12RB2Q99665 862 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 KCNF1Q9H3M0 494 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 IL21RQ9HBE5 538 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 HAUS2Q9NVX0 235 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 ANKRD6Q9Y2G4 727 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 ATP8A1Q9Y2Q0 1164 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 RAI2Q9Y5P3 530 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 SNX11Q9Y5W9 270 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 A0A1W2PR77 199 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 TSPAN11A1L157 253 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 C10orf142B7Z368 130 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 PRAMEF26H0Y7S4 382 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 H0Y8X5 98 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 TRAFD1O14545 582 aaPredicted RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 CDX4O14627 284 aaPredicted RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 RIOK3O14730 519 aaKnown RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 RAD51BO15315 384 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 SOCS5O75159 536 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 TM7SF2O76062 418 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 TJP3O95049 919 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 APOC2P02655 101 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 PDHA1P08559 390 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 CTPS1P17812 591 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 HNRNPA2B1P22626 353 aaKnown RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 AKT2P31751 481 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 CD86P42081 329 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 GRIA4P48058 902 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 LIG3P49916 1009 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 EPHB1P54762 984 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 EIF3EP60228 445 aaKnown RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 POLR2LP62875 67 aaKnown RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 IHHQ14623 411 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 PRKD1Q15139 912 aaPredicted RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 PTPRRQ15256 657 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 RPS6KA1Q15418 735 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 SLC45A4Q5BKX6 768 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 ARMC12Q5T9G4 340 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 DENND2CQ68D51 928 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 KDM7AQ6ZMT4 941 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 KDELC2Q7Z4H8 507 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 ARRDC2Q8TBH0 407 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 NETO1Q8TDF5 533 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 HCAR2Q8TDS4 363 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 SKA1Q96BD8 255 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 ECHDC3Q96DC8 303 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 PDLIM2Q96JY6 352 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 ALS2CR12Q96Q35 445 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 SMIM14Q96QK8 99 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 RBM15Q96T37 977 aaKnown RBP eCLIP9.89□□□□□ -0.83
CALD1-223ENST00000496024 BRD8Q9H0E9 1235 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 GAREM1Q9H706 876 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 TRMT1Q9NXH9 659 aaKnown RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 KLHL8Q9P2G9 620 aaPredicted RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 B4GALT6Q9UBX8 382 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 AMACRQ9UHK6 382 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 TPX2Q9ULW0 747 aaKnown RBP9.89□□□□□ -0.83
CALD1-223ENST00000496024 DMTF1Q9Y222 760 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 CHKBQ9Y259 395 aa9.89□□□□□ -0.83
CALD1-223ENST00000496024 A0A0U1RQS6 177 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 TCRBV7S2A1N4TA0A589 114 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 DCDC2BA2VCK2 349 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 GOLGA6L9A6NEM1 432 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 TLR4O00206 839 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 SLC30A4O14863 429 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 VILLO15195 856 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 HTRA2O43464 458 aaPredicted RBP9.88□□□□□ -0.83
CALD1-223ENST00000496024 LZTS3O60299 673 aaPredicted RBP9.88□□□□□ -0.83
CALD1-223ENST00000496024 OPHN1O60890 802 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 PGLSO95336 258 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 ALPIP09923 528 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 C6P13671 934 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 PTPN3P26045 913 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 RBL1P28749 1068 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 PTPN7P35236 360 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 NUDT1P36639 197 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 MMP12P39900 470 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 ID4P47928 161 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 SUOXP51687 545 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 IL9RQ01113 521 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 WASHC5Q12768 1159 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 NOMO1Q15155 1222 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 PCSK7Q16549 785 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 HLA-BQ31612 363 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 TMEM52BQ4KMG9 183 aa9.88□□□□□ -0.83
CALD1-223ENST00000496024 TEX44Q53QW1 395 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms