RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 WEE1P30291 646 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 SERPINH1P50454 418 aaKnown RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 KCNQ1P51787 676 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 RPS24P62847 133 aaKnown RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 NIPAL4Q0D2K0 466 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 TAZQ16635 292 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 AGMOQ6ZNB7 445 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 LINC00523Q86TU6 105 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 SH3RF2Q8TEC5 729 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 WDR6Q9NNW5 1121 aaKnown RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 GKN1Q9NS71 199 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 DNAJB4Q9UDY4 337 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 ZNF711Q9Y462 761 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 G3V2L1 256 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 DCLK1O15075 740 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 MAN1A2O60476 641 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 TAF10Q12962 218 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 DDX39BQ13838 428 aaKnown RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 FAM187BQ17R55 369 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 TIGD2Q4W5G0 525 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 TBCELQ5QJ74 424 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 UBXN11Q5T124 520 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 ANGPTL8Q6UXH0 198 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 C4orf22Q6V702 233 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 FAM110BQ8TC76 370 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 OLFM1Q99784 485 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 OXSMQ9NWU1 459 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 MARCH2Q9P0N8 246 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 GREB1LQ9C091 1923 aaPredicted RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.24
GPC1-209ENST00000495100 ZNF23P17027 643 aa13.52□□□□□ -0.24
GPC1-209ENST00000495100 NPY2RP49146 381 aa13.52□□□□□ -0.24
GPC1-209ENST00000495100 LRCH3Q96II8 777 aa13.52□□□□□ -0.24
GPC1-209ENST00000495100 ZFP14Q9HCL3 533 aa13.52□□□□□ -0.24
GPC1-209ENST00000495100 HNRNPRO43390 633 aaKnown RBP13.52□□□□□ -0.25
GPC1-209ENST00000495100 UQCRBP14927 111 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 CNPY1Q3B7I2 92 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 SAPCD2Q86UD0 394 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 DENND1CQ8IV53 801 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
GPC1-209ENST00000495100 FETUBQ9UGM5 382 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 VWA7Q9Y334 891 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 U3KQV3 271 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 SSC5DA1L4H1 1573 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 A0A0D9SEW6 157 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 TRAFD1O14545 582 aaPredicted RBP13.52□□□□□ -0.25
GPC1-209ENST00000495100 FBXO21O94952 628 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 GLP2RO95838 553 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 ASGR1P07306 291 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 FLT3LGP49771 235 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 C1QTNF8P60827 252 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 IRX1P78414 480 aaPredicted RBP13.52□□□□□ -0.25
GPC1-209ENST00000495100 TLR1Q15399 786 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 KCTD21Q4G0X4 260 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 LIN52Q52LA3 116 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 HECTD2Q5U5R9 776 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 MAGEE2Q8TD90 523 aaPredicted RBP13.52□□□□□ -0.25
GPC1-209ENST00000495100 COQ10BQ9H8M1 238 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 PDP2Q9P2J9 529 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 TRAF6Q9Y4K3 522 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 AP4S1Q9Y587 144 aa13.52□□□□□ -0.25
GPC1-209ENST00000495100 FOCADQ5VW36 1801 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 GPR182O15218 404 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 GMNNO75496 209 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 GLDCP23378 1020 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 GLUD2P49448 558 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 USP46P62068 366 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 PPIDQ08752 370 aaKnown RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 NFYCQ13952 458 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 OTUD1Q5VV17 481 aaPredicted RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 MAMDC4Q6UXC1 1216 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 ACMSDQ8TDX5 336 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 PPM1MQ96MI6 270 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 OLFM3Q96PB7 478 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 ARMC7Q9H6L4 198 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 CCSER2Q9H7U1 834 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 TLE6Q9H808 572 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 TNFRSF12AQ9NP84 129 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 TRHDEQ9UKU6 1024 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 KANSL1LA0AUZ9 987 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 TSHRP16473 764 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 AOC1P19801 751 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 CHN2P52757 468 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 PTPRNQ16849 979 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 CYP51A1Q16850 503 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 RNF111Q6ZNA4 994 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 HERC6Q8IVU3 1022 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 CENPLQ8N0S6 344 aaPredicted RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 TOP6BLQ8N6T0 577 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 FAM47BQ8NA70 645 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 OR4K2Q8NGD2 314 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 TMEM74Q96NL1 305 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 HAUS8Q9BT25 410 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms