RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 PYGMP11217 842 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 PTPN7P35236 360 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 CTSKP43235 329 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 DSC2Q02487 901 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 PRKD1Q15139 912 aaPredicted RBP17.26■□□□□ 0.35
SNX17-209ENST00000494893 TMEM52BQ4KMG9 183 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 SETMARQ53H47 684 aaPredicted RBP17.26■□□□□ 0.35
SNX17-209ENST00000494893 KIAA1161Q6NSJ0 714 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 BRAT1Q6PJG6 821 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 KDM7AQ6ZMT4 941 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 BBS12Q6ZW61 710 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 CCDC50Q8IVM0 306 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 NSMCE1Q8WV22 266 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 SPOCK2Q92563 424 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 HAUS1Q96CS2 278 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 FEM1CQ96JP0 617 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 KLF6Q99612 283 aaPredicted RBP17.26■□□□□ 0.35
SNX17-209ENST00000494893 SEMA3CQ99985 751 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 CEP41Q9BYV8 373 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 SCUBE2Q9NQ36 999 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 AASDHPPTQ9NRN7 309 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 CDV3Q9UKY7 258 aaKnown RBP17.26■□□□□ 0.35
SNX17-209ENST00000494893 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX17-209ENST00000494893 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.25■□□□□ 0.35
SNX17-209ENST00000494893 MIF4GDA9UHW6 222 aaKnown RBP17.25■□□□□ 0.35
SNX17-209ENST00000494893 H0Y8X5 98 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 KCNK3O14649 394 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 RIOK3O14730 519 aaKnown RBP17.25■□□□□ 0.35
SNX17-209ENST00000494893 VILLO15195 856 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 MMP20O60882 483 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 SYPP08247 313 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 MMP2P08253 660 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 TGM2P21980 687 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 CD38P28907 300 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 NUDT1P36639 197 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 MMP12P39900 470 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 ID4P47928 161 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 RWDD2BP57060 319 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 COPS2P61201 443 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 RPS21P63220 83 aaKnown RBP17.25■□□□□ 0.35
SNX17-209ENST00000494893 AP1B1Q10567 949 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 RALGDSQ12967 914 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 PDK1Q15118 436 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 GCNT7Q6ZNI0 430 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 BBS5Q8N3I7 341 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 SLC17A9Q9BYT1 436 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 POLR1EQ9GZS1 481 aaKnown RBP17.25■□□□□ 0.35
SNX17-209ENST00000494893 AMACRQ9UHK6 382 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 DOCK9Q9BZ29 2069 aa17.25■□□□□ 0.35
SNX17-209ENST00000494893 PRAMEF26H0Y7S4 382 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 FZD6O60353 706 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 SOCS5O75159 536 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 PAK4O96013 591 aaPredicted RBP17.24■□□□□ 0.35
SNX17-209ENST00000494893 NR2C2P49116 596 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 SUOXP51687 545 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 CLDN2P57739 230 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 ZNF211Q13398 564 aaPredicted RBP17.24■□□□□ 0.35
SNX17-209ENST00000494893 PTPRRQ15256 657 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 TEAD4Q15561 434 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 HLA-BQ31612 363 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 RALGPS1Q5JS13 557 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 SPATS2Q86XZ4 545 aaKnown RBP17.24■□□□□ 0.35
SNX17-209ENST00000494893 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNX17-209ENST00000494893 BMFQ96LC9 184 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 SMIM14Q96QK8 99 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 WRAP53Q9BUR4 548 aaKnown RBP17.24■□□□□ 0.35
SNX17-209ENST00000494893 OSBPL8Q9BZF1 889 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 ZDHHC5Q9C0B5 715 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 CAAP1Q9H8G2 361 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 DNAAF2Q9NVR5 837 aaKnown RBP17.24■□□□□ 0.35
SNX17-209ENST00000494893 SNX12Q9UMY4 172 aa17.24■□□□□ 0.35
SNX17-209ENST00000494893 FNDC3AQ9Y2H6 1198 aaKnown RBP17.24■□□□□ 0.35
SNX17-209ENST00000494893 DCDC2BA2VCK2 349 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 NEMP1O14524 444 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 PPP1R12AO14974 1030 aaPredicted RBP17.23■□□□□ 0.35
SNX17-209ENST00000494893 URI1O94763 535 aaPredicted RBP17.23■□□□□ 0.35
SNX17-209ENST00000494893 PDHA1P08559 390 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 GM2AP17900 193 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 HNRNPA2B1P22626 353 aaKnown RBP17.23■□□□□ 0.35
SNX17-209ENST00000494893 NXPH1P58417 271 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 ITKQ08881 620 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 UAP1L1Q3KQV9 507 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 PRAMEF14Q5SWL7 426 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 ABI3BPQ7Z7G0 1075 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 UBL4BQ8N7F7 174 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 MFSD2AQ8NA29 543 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 PIH1D2Q8WWB5 315 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 ASB12Q8WXK4 309 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 RTKNQ9BST9 563 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 BRD8Q9H0E9 1235 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 GAREM1Q9H706 876 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 C10orf88Q9H8K7 445 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 EFR3BQ9Y2G0 817 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 COQ6Q9Y2Z9 468 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 TTLL3Q9Y4R7 772 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 PCDHB9Q9Y5E1 797 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 RAI2Q9Y5P3 530 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 SAR1BQ9Y6B6 198 aa17.23■□□□□ 0.35
SNX17-209ENST00000494893 ANKRD36A6QL64 1941 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms